Pseudomonas entomophila: PSEEN4861
Help
Entry
PSEEN4861 CDS
T00362
Name
(GenBank) Dihydrouridine synthase TIM-barrel protein nifR3
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pen03016
]
PSEEN4861
Transfer RNA biogenesis [BR:
pen03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
PSEEN4861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
SOR_SNZ
NMO
NanE
Pterin_bind
Motif
Other DBs
NCBI-ProteinID:
CAK17513
UniProt:
Q1I4C3
LinkDB
All DBs
Position
5168403..5169416
Genome browser
AA seq
337 aa
AA seq
DB search
MSAVRIGPYTLQNNLILAPMAGVTDQPFRTLCKRLGAGMVVSEMVTSDMSLWNSRKSSLR
RIHEGDAEPRSVQIAGGDAQMMAAAARANVEAGAQIIDINMGCPAKKVCNKAAGSALLRD
EALVSEILHAVVGAVEVPVTLKIRTGWDRANKNGLNVAKIAEQAGIQALAVHGRTRADLY
TGDAEYDTIAAIKQAVSIPVFANGDITSPQKARAVLDATGADGLLIGRAAQGRPWIFREV
EHYLRTGEHLPAPALDEVERILLEHLAALHAFYGDVMGVRIARKHVGWYLATRPGGKEFR
SRFNALEDTQAQCANVQAFFAERRQSLGTEDEQGVAA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggtacgcatcggcccatacacactgcagaacaacctgatcctcgcgcccatg
gccggggtcacggaccagcctttccgcacactttgcaaacgcctcggggcgggcatggtg
gtgtcggaaatggtgaccagcgacatgagcctgtggaacagccgcaagtcgagcctgcgc
cgcatccatgaaggcgacgcggagccccgctcggtgcagatcgccggtggcgacgcgcag
atgatggcggcggcggcccgggcgaacgtcgaagccggcgcgcagatcatcgacatcaac
atgggctgcccggcaaaaaaagtctgcaacaaagccgcaggctctgctttattgagagat
gaagccttggtcagcgagatcctccacgccgtggtcggcgcagtggaggtcccggtgacg
ctgaagatccgcaccggctgggaccgggcgaacaagaacggtctgaacgtggcgaagatc
gccgaacaggccggtatccaggcgctggcggtgcatggccgcacacgcgccgacctgtac
accggtgacgccgagtacgacaccatcgccgcgatcaagcaggcggtgtcgatcccggtg
ttcgccaacggcgacatcacctcgccacaaaaggcccgggcggtgctggacgccaccggc
gccgacggcctgctgatcggccgcgccgcccaagggcggccgtggatcttccgcgaggtc
gagcattacctgcgcacgggcgagcacctgcctgcaccggcgctggacgaagtggaacgc
attctgctggaacacctggccgcgttgcatgccttctatggcgatgtgatgggcgtgcgt
atcgcccgcaagcacgttggctggtacctggcgacccgacccggcggcaaggagttccgc
agccggttcaacgccttggaagacacacaagcgcagtgcgccaacgttcaggcctttttc
gccgagcgtcgacagagccttgggacagaggacgaacaaggggtggccgcatga
DBGET
integrated database retrieval system
