Pseudomonas entomophila: PSEEN5130
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Entry
PSEEN5130 CDS
T00362
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pen
Pseudomonas entomophila
Pathway
pen03030
DNA replication
pen03430
Mismatch repair
pen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSEEN5130
03430 Mismatch repair
PSEEN5130
03440 Homologous recombination
PSEEN5130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pen03032
]
PSEEN5130
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN5130
Enzymes [BR:
pen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSEEN5130
DNA replication proteins [BR:
pen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSEEN5130
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSEEN5130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAK17759
UniProt:
Q1I3M7
LinkDB
All DBs
Position
5447910..5448620
Genome browser
AA seq
236 aa
AA seq
DB search
MNLFAWLRPAVPHLDDRLRQRLAQLPRPAPPAVCSLREQRWVVLDLETSGLNLNRDQVLS
IGAVAIEDGAIDLGRPFERTLHRPTQKTNASVLIHRLGPSALAAGCDPAEALLDLLAFIG
DSPVLAFHAPFDQRMLARALKDSLGLRLQHVFLDVAELAPMLNPDTVLREAGLDDWIARF
GLEVQARHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLKQWRRRKVHNHGF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctgttcgcctggttgcgcccggcggtaccgcacctggacgaccgcctgcgtcag
cgtctggcgcagttgcccaggcccgcgccaccggcggtgtgctcgctgcgcgaacagcgc
tgggtggtgctggacctggagaccagcggcctgaacctcaaccgcgaccaggtgctgtcg
atcggcgcggtggccatcgaggatggcgccatcgacctggggcgcccgttcgagcgcacg
ctgcaccggcccactcagaagaccaatgccagcgtattgatccaccgcctcggccccagt
gccctggcggcgggatgcgacccggccgaggcgttgctcgacctgctggcgttcatcggc
gacagcccggtactggcgttccacgccccgttcgaccagcgcatgctggcccgagccctg
aaggacagcctgggcctgcgcctgcagcatgtgttcctcgacgtcgcggaactggcgccg
atgctcaaccccgacacggtgttgcgcgaagccgggctggatgactggatcgcccgcttc
ggcctggaggtgcaggcccgtcaccatgccagtgccgatgcccaagtcacggcggagctg
gcgttgatcctgttcagccaggcccgccgccagcagttggacagtccgctgcagctggag
cagcggctcaagcagtggcgtcggcgcaaggtacataaccacggcttctga
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