Pseudomonas entomophila: PSEEN5366
Help
Entry
PSEEN5366 CDS
T00362
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pen
Pseudomonas entomophila
Pathway
pen00300
Lysine biosynthesis
pen00470
D-Amino acid metabolism
pen01100
Metabolic pathways
pen01110
Biosynthesis of secondary metabolites
pen01120
Microbial metabolism in diverse environments
pen01230
Biosynthesis of amino acids
Module
pen_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSEEN5366 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSEEN5366 (dapF)
Enzymes [BR:
pen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSEEN5366 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
CAK17983
UniProt:
Q1I303
LinkDB
All DBs
Position
5683390..5684220
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRNTGIGFDQLLIVEAPSNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVRNDGQVCVDM
GPPRFVPADIPFIADEQALSYPLEVDGQVHQIAAVSMGNPHSVLRVDDVRTAPVHELGPK
IEHHPRFPQRVNAGFIQVVDRHRANLRVWERGAGETQACGTGACAAAVAAIAQGWMDSPV
TIDLPGGRLSIEWAGPGKPVLMTGPAVRVFEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgtttcaccaagatgcacgggctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcccatatccaacccaagcacgccaagcaatggggcgaccgcaacacc
ggcatcggcttcgaccagttgctgatcgtcgaggcccccagcaacccggacgtggacttc
cgctatcggatcttcaacgccgatggttccgaggtcgaacagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccgcgaaaaagcgtatccgcgtcgaa
accaagggcggcatcatcgagctggatgtgcgcaacgatggccaggtctgtgtcgacatg
ggcccgccgcgcttcgtgccagccgatatcccgttcatcgccgatgagcaggcgttgagc
tacccgctcgaagtcgatggacaggtgcaccagattgccgccgtgtccatgggcaacccg
cattcggtactgcgcgtcgacgatgtgcgtaccgcgccggtccacgagctggggccgaag
atcgagcaccacccgcgcttcccgcagcgggtcaacgccggcttcatccaggtcgtcgac
cgccaccgcgccaacctgcgggtatgggagcgcggcgcgggcgaaacccaagcctgcggt
accggcgcctgtgccgcggccgttgcggccatcgcccagggctggatggactcgccggtg
accatcgacctgccaggcgggcgcctgagcatcgagtgggccggccccggcaagcctgtg
ctgatgaccggcccggctgtacgcgttttcgaaggacaggttcgtctctaa
DBGET
integrated database retrieval system