KEGG   Pseudomonas entomophila: PSEEN5366
Entry
PSEEN5366         CDS       T00362                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pen  Pseudomonas entomophila
Pathway
pen00300  Lysine biosynthesis
pen00470  D-Amino acid metabolism
pen01100  Metabolic pathways
pen01110  Biosynthesis of secondary metabolites
pen01120  Microbial metabolism in diverse environments
pen01230  Biosynthesis of amino acids
Module
pen_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pen00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PSEEN5366 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PSEEN5366 (dapF)
Enzymes [BR:pen01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PSEEN5366 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like
Other DBs
NCBI-ProteinID: CAK17983
UniProt: Q1I303
LinkDB
Position
5683390..5684220
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRNTGIGFDQLLIVEAPSNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVRNDGQVCVDM
GPPRFVPADIPFIADEQALSYPLEVDGQVHQIAAVSMGNPHSVLRVDDVRTAPVHELGPK
IEHHPRFPQRVNAGFIQVVDRHRANLRVWERGAGETQACGTGACAAAVAAIAQGWMDSPV
TIDLPGGRLSIEWAGPGKPVLMTGPAVRVFEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgtttcaccaagatgcacgggctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcccatatccaacccaagcacgccaagcaatggggcgaccgcaacacc
ggcatcggcttcgaccagttgctgatcgtcgaggcccccagcaacccggacgtggacttc
cgctatcggatcttcaacgccgatggttccgaggtcgaacagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccgcgaaaaagcgtatccgcgtcgaa
accaagggcggcatcatcgagctggatgtgcgcaacgatggccaggtctgtgtcgacatg
ggcccgccgcgcttcgtgccagccgatatcccgttcatcgccgatgagcaggcgttgagc
tacccgctcgaagtcgatggacaggtgcaccagattgccgccgtgtccatgggcaacccg
cattcggtactgcgcgtcgacgatgtgcgtaccgcgccggtccacgagctggggccgaag
atcgagcaccacccgcgcttcccgcagcgggtcaacgccggcttcatccaggtcgtcgac
cgccaccgcgccaacctgcgggtatgggagcgcggcgcgggcgaaacccaagcctgcggt
accggcgcctgtgccgcggccgttgcggccatcgcccagggctggatggactcgccggtg
accatcgacctgccaggcgggcgcctgagcatcgagtgggccggccccggcaagcctgtg
ctgatgaccggcccggctgtacgcgttttcgaaggacaggttcgtctctaa

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