Pseudomonas entomophila: PSEEN5504
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Entry
PSEEN5504 CDS
T00362
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pen
Pseudomonas entomophila
Pathway
pen03420
Nucleotide excision repair
pen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSEEN5504 (uvrD)
03430 Mismatch repair
PSEEN5504 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pen03400
]
PSEEN5504 (uvrD)
Enzymes [BR:
pen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSEEN5504 (uvrD)
DNA repair and recombination proteins [BR:
pen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSEEN5504 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PSEEN5504 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAK18113
UniProt:
Q1I2M3
LinkDB
All DBs
Position
5826815..5828998
Genome browser
AA seq
727 aa
AA seq
DB search
MRNDDLSLLLNSLNDAQRQAVAAQVGRQLVLAGAGSGKTRVLVHRIAWLIQVVQASPHSI
LSVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLAQNFQILDSD
DQQRLIKRVIREMGLDEQKWPARQVQWFINGQKDEGLRPRHIQASGDLFLTTMRDIYSAY
EQACERAGVIDFSELLLRALDLWRDQPGLLEHYQRRFRHILVDEFQDTNAVQYAWLRLLA
GGGDSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAELIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDLGEGEPLTLYAAFNEHDEARYVVETIESLIKQGNARSDIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHSQSSMWDAMCQLLAAKALKGRAASALGAFIELLDNLAAKVLDMPL
HLMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFETSDEDADLTPLSAFLGH
ASLEAGDSQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFGGA
KTPASSLFANASIPQTAFSLGQRVQHAVFGEGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgatgacctctccctcctgctgaactccctcaacgacgctcaacgccaggcc
gtggcggcccaggtcgggcggcaattggtgctggccggcgccggctcgggcaagacccgc
gtgctggtgcaccgtatcgcctggctgatccaggtcgtgcaagcctcgccgcattcgatc
ctgtcggtgacgttcaccaacaaggccgcggcggaaatgcgccaccgcatcgagcaattg
ctgggcatcaacccggccggcatgtgggtcggtaccttccacggcctggcccaccgcctg
ttacgggcgcactggcaggaagcggggctggcgcagaatttccagatcctcgacagcgac
gaccagcagcgcctgatcaagcgggtgatccgcgagatgggtctcgacgagcagaaatgg
cccgcgcgccaggtccagtggttcatcaacgggcagaaggacgaaggtctgcgcccacgg
catatccaggccagcggcgacctgttcctgaccaccatgcgtgacatctacagcgcatac
gagcaagcctgcgagcgcgccggggtcatcgacttctccgagcttttgctgcgcgctctc
gacctgtggcgcgaccagccagggttgctcgaacactaccagcgccgcttccggcacatc
ctggtggacgagttccaggacaccaacgccgtgcaatacgcctggctgcgtctgctggcc
ggcggcggcgacagcctgatggcggtgggtgacgacgaccagtcgatctacggctggcgc
ggcgccaagatcgagaacatccaccagtacaccgccgacttcccggacgccgagctgatc
cgcctggagcagaactaccgctccaccggtggcatcctcaaggccgccaacgccttgatc
gccaacaacagcgggcgcctgggcaaggagctgtggaccgacctgggtgaaggcgagccg
ctgacgctctacgccgccttcaacgaacacgacgaagcgcgctatgtggtcgagaccatc
gaaagcctgatcaagcagggcaacgcccgcagcgatatcgccatcctgtatcgctccaac
gcccagtcgcgggtgttggaggaggccttgctgcgcgagcgcatcccctaccgcatctac
ggcggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcctacctgcgcttg
ctcgaaggccgcggcaacgacgcggcgctggagcgggtgatcaacgtgccgccacgtggt
atcggcgagaagaccgtcgaggccattcgcgagcatgcccgtcacagccagtcgtcgatg
tgggacgcgatgtgccagctgctcgccgccaaggccctcaaaggccgcgccgccagcgcc
ctgggcgcattcatcgagctgctcgacaacctcgccgccaaggtgctggacatgccgctg
cacctgatgacccagacggtcatcgagcagtccggcctgatcatctaccaccaggaagaa
aagggtgaaaagggccaggcacgggtggaaaaccttgaagaactggtcagcgccgcgcgc
aacttcgagaccagcgacgaggatgccgacctgacgccgttgtcggcgttcctcggtcac
gcctcgctggaggccggcgacagccaggccgacgagcacgaggacagcatccagctgatg
accctgcacagtgccaagggtctggaattcccgtacgtgttcctggtgggcatggaggaa
gggctgttcccgcacaagatgagcctggaagagcccggccgcttggaagaggaacgccgc
ctggcctacgtgggcattacccgggccatgcgtcagctggtcatgacctacgccgagacc
cgccgtctgtatggcagcgaaacgtacaacaaggtgtcgcgcttcgtccgcgagatcccg
gcgggcctggtgcaggaagtgcgcctgtcgaactccgtcagccgccccttcggcggcgca
aagacgcctgccagcagcctgttcgccaacgccagcatcccgcagaccgccttcagcctc
ggccagcgggtgcagcacgcggtgttcggcgagggcgtgatcctcaacttcgagggttcc
ggcgcccaggcgcgggtgcaggtgaacttctccgagggcagcaagtggctgatgctcggt
tacgccaagctcgaagccatctga
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