Porphyromonas endodontalis: LA319_00085
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Entry
LA319_00085 CDS
T08002
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pend
Porphyromonas endodontalis
Pathway
pend00260
Glycine, serine and threonine metabolism
pend00460
Cyanoamino acid metabolism
pend00630
Glyoxylate and dicarboxylate metabolism
pend00670
One carbon pool by folate
pend00680
Methane metabolism
pend01100
Metabolic pathways
pend01110
Biosynthesis of secondary metabolites
pend01120
Microbial metabolism in diverse environments
pend01200
Carbon metabolism
pend01230
Biosynthesis of amino acids
pend01240
Biosynthesis of cofactors
pend04981
Folate transport and metabolism
Module
pend_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LA319_00085
09102 Energy metabolism
00680 Methane metabolism
LA319_00085
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LA319_00085
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LA319_00085
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LA319_00085
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LA319_00085
Enzymes [BR:
pend01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LA319_00085
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UBH64629
LinkDB
All DBs
Position
complement(17064..18344)
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AA seq
426 aa
AA seq
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MNKDNIIFSLIEEEHQRQMKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGC
EVVDKSEQIAIDRIKQLFDAEWANVQPHSGAQANMAVLLACLEAGDTFMGLNLDHGGHLS
HGSLVNSSGILYKPVGYNLSRETGMVDYDEMEQLARQHKPKLLIAGGSAYSREWDYERMR
KIADEVGAIFMVDMAHPAGLIAAGLLKNPVKYAHIVTSTTHKTLRGPRGGIILLGKDFEN
PWGKKTPKGEIKKMSQLLDSAVFPGVQGGPLEHVIAAKAVAFGEALDPSFKVYQEQVKLN
AATIAKAFMDCGYNVISGGTDNHSMLIDLRTKYPDLTGKVAEKALVAADITVNKNMVPFD
SRSAFQTSGFRVGTPAITTRGVKEDKMPIIVELIDRVLRDPENDAVIAAVRAEVNNMMRE
YPIFAW
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagacaacatcatcttcagcctcatcgaggaagagcatcagcgccaaatgaaa
ggcattgagcttattgcctctgagaacttcgtaagcgaacaggtaatgcaggctatgggt
agctgcatgaccaataagtatgccgaagggtatcccggtaagcgttactatggtggttgc
gaagtagtagacaaaagtgagcaaatcgccatcgatcgcatcaagcaactctttgatgca
gagtgggcaaacgtacaacctcactcaggagcacaagccaatatggccgttctcctcgct
tgtctagaggctggcgacacctttatgggacttaacctcgatcatggtggtcacctttct
cacggttctcttgttaatagctcaggtatcctctataagcccgtgggctacaatctgagc
cgcgagaccggtatggtagactacgatgagatggagcaactcgctcgtcagcacaagccc
aagctccttatcgccggtggttcggcttactctcgagagtgggactacgaacgcatgcgt
aagattgccgacgaagtaggggctatcttcatggtggatatggctcaccctgccgggctt
atcgctgccggtcttctcaaaaaccctgtaaagtatgctcatatcgtaacctctacaacg
cacaagacactccgtggtcctcgtggaggtatcatccttttgggtaaagactttgagaat
ccttggggtaagaaaacacctaagggcgagatcaagaagatgtctcaattgcttgactct
gccgtatttcccggagtacaaggtggtcctcttgagcatgttatcgctgctaaggctgtt
gcttttggcgaagctctcgacccctcattcaaggtatatcaagagcaggtaaagctcaat
gctgctaccatcgctaaggcctttatggattgtggttacaacgtaatctccggtggtacg
gacaaccactcaatgcttatcgacctccgcaccaagtatcccgatcttacgggtaaggta
gcagagaaggctctcgtagccgctgatattacagtgaataagaacatggttcccttcgat
agtcgctctgcattccagacttcgggcttccgcgtgggtactcctgctattactactcgt
ggcgtgaaagaagacaagatgcctatcatcgttgagcttattgaccgcgtacttcgtgac
ccggaaaatgatgctgtaattgctgccgttcgtgccgaagtaaacaacatgatgcgcgag
tatcctatcttcgcttggtaa
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