Porphyromonas endodontalis: LA319_01625
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Entry
LA319_01625 CDS
T08002
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pend
Porphyromonas endodontalis
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pend03016
]
LA319_01625
Enzymes [BR:
pend01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LA319_01625
Transfer RNA biogenesis [BR:
pend03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LA319_01625
Prokaryotic type
LA319_01625
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UBH64904
LinkDB
All DBs
Position
complement(377791..378705)
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AA seq
304 aa
AA seq
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METLSVHILGCGSALPTTKHNPSAQALTLRGKVYLVDCGEGTQLQIRRQGLHFGRIHTIF
ISHLHGDHCFGLPGLLSTLSMLGRTGELHIHGPEGLTEYIDAHRKSFLAECSYEIITHEH
DYRKSEVIHEDPSLCVRSLPLSHRIPTMGFLFEERCAARHLDKPAVDFYQVPRCCYPAIL
LGESYTAQDGSIIPNNRLTKPGRIPRRYAYCSDTEYFPDLIEQVRGVDLLYHEATFGEDL
RARLATTAHSTARDAATIALKAEVKRLLIGHYSSRYTDVTPLLDEARSVFPNTTAAQEGL
IIHL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctatcggtacatatattgggttgtggttctgctctcccaaccacgaagcac
aatccttccgctcaggcacttacccttagaggtaaggtctatttggtggactgtggcgag
ggcacccagctccagattcgccggcaaggtcttcactttggacgcattcacactattttc
atatctcatctccacggtgaccattgctttggtttgccggggttgctttcgaccctctct
atgcttgggcggacgggggagttgcacatccacggaccggaggggcttacggagtatatt
gatgcccaccgcaagagcttccttgccgagtgcagttacgagattattacgcacgaacac
gactaccgcaagagcgaggtgatacacgaagatccttcgctgtgcgttcgctctctaccc
ttgagtcaccgcatccctacaatggggttcctattcgaagagcgttgtgccgctcgccat
ttggataagcctgctgtggatttctaccaagtcccccgctgttgctaccctgccatttta
cttggggagtcttatacagcgcaggatggtagcatcatccctaacaatagactcactaaa
ccgggacgcatcccccgccgctatgcttattgtagcgatacggagtatttccctgatttg
atagagcaggtgcgtggggttgatctcctctaccatgaggctacttttggtgaggatttg
cgtgcgcgccttgctactactgcgcatagtactgcgcgagatgccgccactattgctctc
aaagcggaggttaaacgccttttaattgggcattattcttctagatacaccgatgtaact
cccctcttggacgaagcacgtagtgttttcccaaatacaacagccgcccaagaggggttg
attattcacctataa
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