Porphyromonas endodontalis: LA319_03045
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Entry
LA319_03045 CDS
T08002
Name
(GenBank) ribonuclease H-like domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pend
Porphyromonas endodontalis
Pathway
pend03030
DNA replication
pend03430
Mismatch repair
pend03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA319_03045
03430 Mismatch repair
LA319_03045
03440 Homologous recombination
LA319_03045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pend03032
]
LA319_03045
03400 DNA repair and recombination proteins [BR:
pend03400
]
LA319_03045
Enzymes [BR:
pend01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA319_03045
DNA replication proteins [BR:
pend03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA319_03045
DNA repair and recombination proteins [BR:
pend03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA319_03045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UBH65169
LinkDB
All DBs
Position
complement(725201..725977)
Genome browser
AA seq
258 aa
AA seq
DB search
MELQLKRPLVFFDIESTGLSPEKDRIVEISLIKVYPDGHEEVRTRRLNPECHIPEESTAV
HGITDDDVRDCPTFRQVAKSLASMIQGCDIAGYNSNRFDVPLLGEEFLRADVEVDFSRCR
FIDVQTIFHKMERRTLEAAYKFYCDKDLTEAHSAEADTRATLEVLKAQLDRYPEDLQNDV
EFLSSFTMQQRNLDLAGRFVYNEKDEVVINFGKHKGVPVAEVLKKEPGYYDWVMKADFPE
DTKRHLTRLRFKLASENN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggaactacagctcaagcgtccacttgtattcttcgatattgagtctacggggctcagt
cccgagaaagatcgtatcgtagaaatctccctcatcaaagtctaccccgatgggcacgaa
gaggtgcgcacgcgtcgtcttaacccggagtgccacatccccgaggagagcacagcagtc
cacggcattaccgacgatgatgtgcgcgattgtcccacatttcgacaagtggctaagagc
ttggcttctatgattcaagggtgtgacattgcgggatacaactccaatcgctttgacgta
cccctcctaggagaagaattcctccgcgccgacgtagaggtcgatttctcgcgctgccgt
ttcattgatgtgcaaacgatcttccataaaatggagcgtcgtaccctagaggctgcgtac
aaattttattgcgataaggacttgaccgaggcacactctgccgaagccgacacgcgcgcc
acgctcgaagtgctcaaggctcaactcgaccgctatcccgaagatctgcaaaacgatgtt
gagttcctatcttcttttacaatgcagcagcggaatcttgacttggcaggacgcttcgtt
tacaacgaaaaagacgaggtcgtgattaactttggcaagcacaaaggcgtacccgttgcc
gaggtgctcaaaaaagaaccgggttattacgactgggtgatgaaggccgacttccccgaa
gacaccaagcggcatcttacgcgccttcgcttcaaacttgcttccgaaaacaactaa
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