Porphyromonas endodontalis: LA319_03695
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Entry
LA319_03695 CDS
T08002
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pend
Porphyromonas endodontalis
Pathway
pend03030
DNA replication
pend03430
Mismatch repair
pend03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA319_03695 (dnaX)
03430 Mismatch repair
LA319_03695 (dnaX)
03440 Homologous recombination
LA319_03695 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pend03032
]
LA319_03695 (dnaX)
03400 DNA repair and recombination proteins [BR:
pend03400
]
LA319_03695 (dnaX)
Enzymes [BR:
pend01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA319_03695 (dnaX)
DNA replication proteins [BR:
pend03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA319_03695 (dnaX)
DNA repair and recombination proteins [BR:
pend03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA319_03695 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
AAA_16
AAA_5
AAA_14
RCF1-5-like_lid
AAA_assoc_2
AAA_2
RNA_helicase
DUF815
Rad17
AAA_18
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UBH65287
LinkDB
All DBs
Position
complement(879006..880790)
Genome browser
AA seq
594 aa
AA seq
DB search
MSEKFVVSARKFRPDSFESLLGQEAVSETLRRAILQQKTAHAYLFCGPRGVGKTSAARIF
ARAINCASPLASGEACGECDSCRAFAEQRSFNVFEMDAASNNSANDIRQLIEEVNIPPQV
GRYKIYIIDEVHMLSTAAFNAFLKTLEEPPEYVVFIMATTEKQKILPTILSRCQVFDFKP
IPSDVIIGQLRHIAQLEEIQVEEKALELIARKADGGMRDALSVFDRIASYTDGEVSYSRT
LESLNILDDDYYFRFVDLLVHNDYASTLLLLDELIMRGFDPRTIVLGLTDFLRNLLLAFD
PQTLPLLHLTKETEASYNQLAQASGRGFLYQAIAKLMECLKEYRNSNAKRLLVEMTLLSL
TSLAQERVSASHTPNQRPTPAATPPSAPSPVAAPRPQPIAAPAPARPSAPPTPRQTGAST
EAPQSIDLPKPPPTASMAAPRPVAPAPRPAVAPSPTATSAAAPKAPTQEKRSFTETEMQI
AWNAYAEEHLQKNLFLKNAFNEVLPKLHNGTEIEAIMFNMLQVNAVERIKGSLLSYLRSA
LHNSDITLQVRQIETIEEERSQRSITPLELFRSLAAEPQTPLHQFIQALKLRPL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagtttgtagtatcagcccggaaatttcgtccggactccttcgagagctta
ctaggtcaagaggctgtaagtgaaactctccgaagggctattttacagcagaagacggcg
cacgcctatcttttttgcggcccaagaggggtaggaaagacctccgcagcccgtattttt
gctagagccatcaattgcgcgtcgccccttgctagcggcgaggcgtgcggcgagtgtgat
agttgccgagcctttgccgagcagcgttctttcaacgtttttgagatggacgcggcctcc
aacaactctgccaacgacatacgccagctcatcgaggaggtaaacattcctccccaagta
gggcgttacaaaatctatatcatcgacgaggtgcacatgctctcgacggcggcgttcaac
gccttcctcaaaacgctggaggagccacccgagtatgtcgtcttcatcatggctaccacc
gagaagcaaaagatacttcccaccatcctctctcgctgccaagtattcgacttcaaaccc
atccctagcgatgttatcatagggcagttgcggcatattgcccagctagaagagatccaa
gtagaggagaaggctctagagctcattgcccgaaaagccgatggagggatgcgcgatgcc
ctctcagtattcgaccgaatagcgagctataccgatggcgaagtatcctatagtcgtacc
ctagagagcctcaacatcctagacgacgattactacttccgcttcgtggaccttctcgta
cacaacgactatgcctctaccctccttctcctagacgaactcatcatgcgaggcttcgac
cctaggacgattgtcttggggctgaccgacttcttgcgcaaccttctcttagcattcgac
ccacagacgctgcctcttttgcacttaaccaaagagacagaggcctcatataatcaattg
gctcaggcttccggacgcggatttttgtaccaagcgatcgcaaaactgatggagtgtctc
aaagagtatcgcaatagcaatgctaagcgacttttggtagaaatgactctcctctccctc
acctcgcttgctcaagaaagggtttcggcaagccacacccccaatcaacgcccaacaccg
gcagcgacaccgccctctgcgccaagtcctgtagccgctcccagaccacaaccaatcgcg
gctccggctccggcacgccctagtgctccacccacccctcgccaaacaggagcttccaca
gaggctccacaatccattgacctacccaagccacccccaacggctagcatggcagcgcct
cgccctgtagctccggctcctcgtcccgcggtagctccttcgcccactgcgacttctgca
gctgcccccaaggctcccactcaagagaaacggtcctttactgagaccgaaatgcagatt
gcgtggaacgcctatgcagaggaacatttgcaaaagaacctctttctcaagaacgccttc
aatgaggtactacccaagctccacaacggcacagagatagaggcaatcatgtttaatatg
ctgcaagtgaacgctgtagaacgcataaagggttccctcctaagctacctccgaagtgcg
ctacacaatagcgacattacgctacaagtgcggcagatcgagactatagaagaggaacgc
agccaacgaagcatcacgccactagagctcttccgctccctggctgccgagccacaaacg
cctcttcatcagtttatccaagcgctcaagttgcgccctctctag
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