Porphyromonas endodontalis: LA319_05010
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Entry
LA319_05010 CDS
T08002
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pend
Porphyromonas endodontalis
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pend03009
]
LA319_05010
Enzymes [BR:
pend01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LA319_05010
Ribosome biogenesis [BR:
pend03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LA319_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UBH63915
LinkDB
All DBs
Position
complement(1173455..1174834)
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AA seq
459 aa
AA seq
DB search
MENKDSIESEEKALQNSEKSSAEAAPEKEQEATASESKVSNNETPTKTNTGGRKRTRTRI
SQTTDRKSCILVSTDEDKRGSASIISRNNDASRAVAQQKESNNDEDWDISLEGMFDKLSR
EADEVIGRTMQMLEQDEPVRTSSHRPTHHVRDRRSSQEGGREDDRPIYPFERQKKRHNAE
PLDEKAQHAGQSPKGKKKKKKKIQRRPEEVISYPEMPVDPKTPLRLNKFLASSGVCSRRV
ADQLIVDGHVSVNGEIVTQLGKHVTREDFISVDGKPVSIEKKIYVLLNKPRNCVTTSSDP
EKRLTAIDLVRNACNERIYPVGRLDRNTTGLLLLTNDGDLAAKLMHPKYEKKKIYQVTLD
KPVSVEHMQQIASGIELEDGEIHADAISYVDENNLAIVGIEIHSGRNRIVRRIFKHLGYR
VYKLDRVYFAGLTKKDLPRGRWRYLTEDEVRNLRHDFYE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaagactccatcgaatctgaagaaaaagcactccaaaactcagagaagtcc
tcagcagaggcagcacctgagaaagagcaggaagccacagcttcagaatcaaaagtctca
aacaacgagaccccaactaaaacaaatacaggaggacgcaagcgtacccgcacccggatt
tcccaaaccaccgaccgcaaaagttgtatccttgtttctaccgacgaagacaagcgtggt
agcgcttccatcattagtagaaacaacgatgcctcccgtgctgtagcacagcaaaaggag
agcaacaatgacgaagattgggatatatcactcgaaggcatgtttgacaaactttcacgc
gaagcagacgaagtgatagggcgcaccatgcaaatgctcgagcaagatgagcccgtacgc
acctcttctcatcgacccacccaccacgtccgcgacagacgttcttctcaagagggaggc
agagaggacgatagacccatctatccttttgagcgacaaaagaagcgtcacaacgctgag
cctctcgatgaaaaagcacaacatgcaggtcaatcccccaagggcaagaaaaagaaaaag
aagaaaattcaacgcagaccggaggaggttatctcttatcctgagatgccggtggatcct
aagacccctctacgtctcaataagtttttggccagttcgggcgtatgctctcgccgtgtt
gccgaccaactcatcgtggatgggcacgtctctgtaaatggagagattgtcacacaacta
gggaaacacgtcactcgagaagactttatttcggtagatgggaagcccgtttccatcgaa
aagaagatatacgtactgctcaacaaaccacgcaactgcgtaactaccagcagcgacccc
gaaaaacgactcacagccatagacttggtacgtaacgcctgcaacgagcgtatctatccg
gttggtcgtctcgataggaataccacaggtcttctcctccttaccaacgatggtgacctg
gcagcaaagctcatgcaccccaagtacgagaagaagaaaatctatcaagtaacgctcgat
aaacccgtatcggtggagcacatgcaacaaatcgcttcgggcatagagctcgaagatggg
gagatccatgcagatgctatcagctatgtagacgaaaacaatctcgccattgtgggtata
gagatccactcgggtcgcaaccgtatcgtgcgtcgtatattcaagcatcttggctatcgc
gtttacaaactcgatcgcgtttactttgccggcttgaccaaaaaagatcttccacgaggc
agatggcgttacctcacagaggacgaagtacgcaacctccgtcacgacttctacgaatag
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