Porphyromonas endodontalis: LA319_05220
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Entry
LA319_05220 CDS
T08002
Symbol
pyrF
Name
(GenBank) orotidine-5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
pend
Porphyromonas endodontalis
Pathway
pend00240
Pyrimidine metabolism
pend01100
Metabolic pathways
pend01240
Biosynthesis of cofactors
Module
pend_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LA319_05220 (pyrF)
Enzymes [BR:
pend01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
LA319_05220 (pyrF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
UBH63956
LinkDB
All DBs
Position
complement(1223678..1224508)
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AA seq
276 aa
AA seq
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MTRQELIENIKRKRSFLCVGLDTDLRKIPEHLMRTENPMLTFNRAIIDATAGSCVAYKPN
VAFYESMGAFGVQVLEHTVAYIREQYPDQFIIIDGKRGDIGNTGMHYARSSYEYLKADAL
TVAPYMGQDSVKPFLEYKDKWVVLLALTSNQGASDFQLTKNEEGDFFFEQVLKTSSQWSD
DEHMMYVVGATQAEYLQRVRNIVPNHFLLVPGIGAQGGDFDQLIEHGMTPECGLLVNSSR
GILYADSSEHFASAAANEAENLRRKMETALIKQGII
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgactagacaagaactcatagaaaacataaagcggaaacgctccttcctctgtgtagga
ctcgatacagacctccgaaagatacccgagcacctcatgcgcacggaaaatcccatgctc
accttcaatcgtgccatcattgatgccaccgcgggctcttgtgtagcatacaagcccaac
gtagcgttttacgaatccatgggagcctttggagtgcaagtattggagcatacagtggct
tacatacgcgagcaataccccgatcaattcatcatcatagacggtaagcgaggagacata
ggcaacaccggtatgcactacgctcgctcttcctatgagtacctaaaagccgatgcgctt
accgtggctccttatatgggacaggatagcgtaaaaccttttttggagtacaaggataag
tgggttgtactacttgctcttacctccaatcagggggctagcgacttccaactgaccaaa
aacgaagagggagacttcttctttgagcaagtgctcaagaccagcagccaatggagtgac
gacgagcatatgatgtacgtagtgggggcaacccaagccgagtacctgcaacgcgtgcgc
aacattgttcctaatcattttcttttagtgccgggcatcggcgcacaaggtggggatttt
gaccaactcatagagcatggtatgacgccggagtgtggcctcctcgtaaattcttcccga
gggattctctatgccgatagttctgagcattttgcatctgccgcagccaacgaggcagag
aacctccgccgcaaaatggagacggctctaatcaaacaaggaatcatataa
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