Porphyromonas endodontalis: LA319_05245
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Entry
LA319_05245 CDS
T08002
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
pend
Porphyromonas endodontalis
Pathway
pend00230
Purine metabolism
pend01100
Metabolic pathways
pend01110
Biosynthesis of secondary metabolites
Module
pend_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LA319_05245 (purD)
Enzymes [BR:
pend01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
LA319_05245 (purD)
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GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp_3
CPSase_L_D2
ATP-grasp_5
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
UBH65464
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All DBs
Position
complement(1229036..1230340)
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AA seq
434 aa
AA seq
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MQEKRASERLIVLLLGSGGRESAMAWRIATSPEVEQLYIAPGNGGSENYGINVPELSGKD
FDAIADFIASHGVNLLVSGPEEPLVQGIADYFAERKEDFPHLMVVGPNAQGAQLEGSKDF
SKAFMQRYGIPTASYRTFSANEKSEAVAYLQTLHPPFVLKADGLAAGKGVLIVPTLEEAA
KGFDDLAEGIWGSKGQKIVIEEFLQGIECSIFVATDGLNYKVLPAAKDYKRIGDGDMGPN
TGGMGSVSPVPFADEAFMEKVRQRIIEPTLQGLRDEHIEYRGFIFLGLMNVKGDPYVIEY
NCRLGDPETETVMLRISSDVALLLKAIANGTLDEYTLSEDPRPAASVMLVSRGYPGSYKK
GYEITLPDPPHDTCLFHAGTRKLDGKIVTDGGRVLSVSSYGATPEAALKRCYTIAQQVLF
EGKNYRHDIGQDLL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaacgagctagcgaacgcctcatcgtactgctcctaggctccggggggcgc
gagtctgccatggcttggcgcattgccacctctcccgaggtagagcaactctacattgcc
ccaggcaatggagggagcgaaaactacggcatcaatgtaccggaactctcgggcaaagac
tttgacgcaatcgcagactttattgcaagtcatggggtcaacctcttggtttccggcccc
gaagagccccttgtacagggcattgccgactattttgccgagcgcaaagaagacttccct
cacctcatggtcgtagggcccaatgcccaaggagcacagttggaggggagcaaagacttt
agcaaagcctttatgcaacgctacggcatcccaacggcaagttaccgcaccttttcagcc
aacgaaaagagtgaagccgtagcctatctgcaaaccctgcatcctccctttgtgctcaaa
gccgatggtttggcagccggtaagggggtacttattgttcccacactagaggaggctgcc
aaaggcttcgacgaccttgccgaaggcatttgggggagtaagggacaaaaaatagtcatt
gaagagttcctacaaggcattgaatgctccatatttgtggcaaccgatgggctcaattat
aaggtactccccgcagctaaagactacaaacgtattggcgatggcgacatgggacccaat
acgggtgggatggggtctgttagccccgtaccttttgccgacgaggcttttatggaaaag
gtacgccaacgtatcatagaaccaaccctacaagggctgcgagatgaacatatagagtac
cgtggatttatcttcctcgggctaatgaatgtaaagggcgatccctatgttattgagtac
aattgtcgcctaggagaccctgagacggagactgtaatgctccgcatctctagcgatgta
gctcttctcctcaaggctatagcaaacggcacactcgacgaatacacattgagcgaagac
cctcgccctgccgctagtgtaatgctcgtctcccgaggctaccccggaagctacaaaaag
gggtacgagatcacactccccgatcctccccacgacacttgcctcttccatgccggcacg
cgtaaactagacggcaagattgtaaccgatggagggcgagtactctctgtaagctcttat
ggagcaacccccgaagccgccctcaaacggtgctacaccatagcccagcaggtgctattc
gaagggaagaattaccgtcacgatattgggcaagatcttctctaa
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