Porphyromonas endodontalis: LA319_05820
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Entry
LA319_05820 CDS
T08002
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pend
Porphyromonas endodontalis
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pend03016
]
LA319_05820 (truA)
Enzymes [BR:
pend01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LA319_05820 (truA)
Transfer RNA biogenesis [BR:
pend03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LA319_05820 (truA)
Prokaryotic type
LA319_05820 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UBH64063
LinkDB
All DBs
Position
complement(1368361..1369182)
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AA seq
273 aa
AA seq
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MPRYFLDIAFDGSSYCGWQRQPNGLAVQQVIEEALSLLFRTPISIVGAGRTDAGVNAYSL
PAHVDIPETAKGTPYRWRKSLNGILPHNINIRSIRPVQPSAHARFDAISRRYLYFIAEER
DPFNRQWVLPVRPFPDIEKMNQAAQYLLGTHDFTSFSRLHTDTHTNICTIQEAFWSPSSY
PSTWQFSITANRFLRNMVRAIVGTLLEVGASTLAPEDIIEIIRAQDRNRAGASVRGEALF
LAHVEYPKEIYLDSNIPQTDSSSSVFSSCKCNA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatttcttagacatagccttcgatggaagtagctactgtggttggcaacgc
caacccaatgggcttgccgtgcagcaagtgatagaggaggctttatcccttctcttccgc
acccctatctctattgtaggggcaggtcgtaccgatgcgggggtgaatgcttactccttg
ccggctcatgtggatatacccgagactgcaaagggaacaccttatcgctggcgcaaaagt
ctcaatggcatcttacctcataacataaacatccggagcattagaccggtgcagccttct
gcccacgcacgcttcgatgcaatatcccgccgctatctctacttcatagcagaagaacgc
gatcccttcaaccggcaatgggtgctaccggtgcgcccttttcctgacattgagaagatg
aaccaagctgctcaatacctccttgggacgcacgactttaccagctttagtcgtctgcat
accgatacgcatactaatatatgtacgatacaggaggctttttggtccccctcgtcctac
ccttctacttggcaatttagtataactgccaatcgctttttacgcaatatggtacgtgcc
attgtgggcactctcttagaggtaggggcttcaacccttgctccggaagatattatagag
attattcgtgctcaagatcgtaatagagcaggagcctccgtgcgtggagaagcccttttt
ctggctcatgtggagtacccaaaagagatttacttagatagtaatataccccagacagat
agctcttcttctgtattttccagttgtaagtgcaacgcttag
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