Porphyromonas endodontalis: LA319_06005
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Entry
LA319_06005 CDS
T08002
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pend
Porphyromonas endodontalis
Pathway
pend03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LA319_06005 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pend03400
]
LA319_06005 (priA)
Enzymes [BR:
pend01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA319_06005 (priA)
DNA repair and recombination proteins [BR:
pend03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA319_06005 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Zn_ribbon_PriA
PriA_C
DUF7130
RUBY_RBDX
Zn_ribbon_6
HypA
Motif
Other DBs
NCBI-ProteinID:
UBH64096
LinkDB
All DBs
Position
complement(1409326..1411779)
Genome browser
AA seq
817 aa
AA seq
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MLYAGVLLPLSLSDFYHYRVPQELEAKVRVGMRCVVQFGAKRIYVGIIASLSPTLPLGVE
THKVKSLGYLPDDAPIISQEEIDSWLWAAHYYMATPGDLLHAALPATLLPESRTEVLIDF
EQADSDASLGRTESEVVENLRSITGKGIHFETLLQYIPGRNKLSIFDQLVAHGVLSLKER
VRGVEKRIGERWLYLNPKYQSDDALNLLLDAYKRRPARMRLLYRFVELLPDQEHSLSGSV
REKELIAGDSNRQNALRYLLSEGVLERSFRQYASTDRPPEYQIDPNLPPLESDRPNYYTA
ATYSDELERIGAYSAAVLARGGRVLLLLPQSSGLEGDLPSLCSQLKLPVETPLYLYTSSL
SDRERASLRYRLTESDAPLIVVGSRMAALLPLEGVELIIVAEEQDPLYKQQEPAPRFNAR
DLLAYRATKGKIPLLLTSVTPSMETYHNVANDKYAATASQESFTLATFRTIDLDYERTTR
RLKTGTLLSLPLREAISETLKKGEKVVLVSARRGYAPYILCQKCGKSIRCLHCDVSLTYH
QMENRLTCHYCGYNLSLPPQCPHCGADREELKKVGYGSERIEDELATLYPEEEIVRIDAD
TTSGKEKRSHIRSALAEGKASLYVGTQMLTHFAPIQGVGLVAVPQLDAMLALPDFRTDEL
VFALLYRLAVKYPEALMLLQTSDTQRPLFQYLDMPSRELREKYAELVLQERTFFGFPPYE
RIIQVVVKSTREEDAIETATLLSRHFGSYPGLAHVSASIKPYVSRVRLMYIRQITLKLAP
NYSAKQIREALKSILHQVERTSLSARRSRILFDVDPL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacgccggcgtactgctcccactaagcctaagcgacttttaccactaccgagtg
ccccaagagcttgaggcgaaagtgcgagtaggtatgcgctgcgtcgtacaattcggggcg
aagcgcatctacgtaggtatcatagcgagcctctctcccacgcttccgttgggagtggag
acgcacaaggtaaagtccttaggatacctaccggacgacgctcccattatttcccaagaa
gagatcgactcatggctctgggctgcccattactacatggcaacgccgggagatctgctg
cacgcggctctgcctgccacactcctacccgagagccgaacggaggtacttattgatttc
gagcaagccgactccgacgcctccctcgggcgcactgagagcgaagtagttgagaatctc
cgctcaatcacaggcaaagggatccacttcgaaaccctattgcaatacatcccggggcgc
aataaactctccattttcgaccagctcgtagcccacggcgtcctctccctaaaggagcga
gtacggggagtagaaaaaagaatcggggagcgatggctctacctaaaccccaagtaccaa
tcggacgatgctctgaacctgctcttggatgcctataagcgaagacctgctcggatgcga
ttgctctaccgctttgtggagcttctccccgatcaggagcattccctttccggctccgtc
cgcgaaaaagaactgatcgcaggggatagcaaccgacaaaacgccctgcgttacctcctc
tccgaaggggtgctggaacgctcctttcggcaatatgcctctaccgaccgccctcctgag
tatcaaatagacccgaatcttccacctttggagagcgatcgtcccaactactacaccgct
gcaacgtacagcgatgaactggagcgaattggagcctactcggccgccgtgctagcacga
ggaggacgcgtgctccttttactcccccagagtagcggattagagggcgacctcccctcg
ctttgctcccaactaaagctccccgtagagacgcctctctacctctacaccagcagccta
tccgatcgcgaacgagcctccctacgctatcgcctaacagagagcgacgcccctcttatc
gtcgtgggaagtcgcatggcggctctacttccattggagggggtcgaactcatcatcgta
gctgaggagcaggatcctctctacaagcaacaggagccggcacctcgcttcaatgcccga
gacctactcgcctacagagctacaaagggcaagattcccctacttctcacctccgtaact
ccctccatggagacgtaccacaacgtcgccaacgacaagtatgccgctacagcgtctcag
gagtcgtttaccctagccacctttcgcaccatcgatttggactacgagcgcacgactcgc
cgcctcaagacggggacgttactgagcctcccccttcgagaggccatatccgagacgcta
aaaaagggtgagaaggtagttttggtaagtgctcgacgcggatacgcaccctatatcttg
tgccagaagtgtggcaaaagcatccgttgcctacattgcgatgtaagcctcacctaccat
cagatggagaatcggctcacctgccactactgcggttacaatctatcactaccgccgcaa
tgtccacactgtggagcggatcgggaggagctgaagaaggtaggctacggttcggaacgc
attgaggacgaactagccacgctctaccccgaggaggagatcgtacgcattgacgccgat
acgacctccggcaaggaaaagcgaagccacatccgaagtgcgctagcggaggggaaggcc
tccctctacgtgggtacccaaatgctcacacactttgccccgattcagggggtaggacta
gttgcggtaccccaacttgatgccatgctcgccctacccgacttccgtacggacgaatta
gtcttcgccctcctctaccgcttggctgtgaagtaccccgaagccctcatgctcctacaa
acaagtgatacgcagcgtcctctcttccagtatctcgacatgccctctcgcgaactgaga
gagaagtacgcggagttggtactacaggagcgcacatttttcggcttccctccctacgag
cggatcattcaggtagtagttaaaagcacgagggaagaagatgcaatagagacggcaacg
ctcctctcccggcacttcgggagctaccccggactagctcacgtatccgcctccatcaag
ccctatgtatctcgcgtacgactcatgtacattcggcagattaccctcaagttggctccc
aactactcggcaaagcagattcgcgaagccttaaaaagcatcctccatcaggtggagcgt
acctcgctttctgcccgacgctctcgtatcctcttcgacgtagatcccctctaa
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