Porphyromonas endodontalis: LA319_06085
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Entry
LA319_06085 CDS
T08002
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pend
Porphyromonas endodontalis
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pend03016
]
LA319_06085 (truB)
Enzymes [BR:
pend01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LA319_06085 (truB)
Transfer RNA biogenesis [BR:
pend03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LA319_06085 (truB)
Prokaryotic type
LA319_06085 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UBH64112
LinkDB
All DBs
Position
complement(1431235..1432020)
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AA seq
261 aa
AA seq
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MSEIVLHTRTQDGKPIAPLTLRMGSIIAVDKPLDWTSFDVVNRFRIMVKQTVGLKKIKVG
HTGTLDPKATGLLLLCTGRATKQIEQLMLNRKEYVATLKFGATTPSFDLEHPEDAHYPYE
HITQGMLEEALQEFLGTTLQVPPIFSAVSVGGKRAYDLARKGKDCQLEGKPITIHELEVV
SFEPPYATLRVSCGKGTYIRSLARDLGERLQSGAYLTALRRTQLGNVRVEDSLTLEELPD
FLAHAELNEEGFDPIVPPTSK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatcgtactgcatactcggacgcaagatggaaaaccgatcgcaccccttacc
ctcaggatgggtagtatcattgccgtagacaaacccctcgattggacttcgttcgatgtg
gtaaatcgcttccgcatcatggtgaagcaaaccgttggactcaagaaaatcaaggtaggg
catacaggcacattagatcccaaggcaaccggattgctcctcctctgtacggggcgagcc
accaaacaaatagagcaactaatgctcaacagaaaagagtatgtggccaccctcaaattt
ggagccactaccccatcgttcgatctagagcaccccgaagatgcccactacccctatgag
catataactcagggcatgctggaggaggctctacaggagttcctcggaacaacgctgcaa
gtgccccctatattttcagccgtctccgttgggggcaaacgtgcatacgaccttgcacgt
aaaggaaaggattgccaactggagggcaaacccattacgattcacgagctagaggtcgta
agtttcgagcctccctatgcaactctacgagtgagttgtggcaagggcacttacatccgc
tctctcgctagagacctcggggagaggctccaaagtggagcctacctcaccgctctacgg
cgcacgcagctgggcaatgtacgggtagaggatagtctcacactggaagagttgcccgat
tttctagcccatgcagaactaaacgaagagggattcgaccccattgtcccccctacttcg
aagtag
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