Porphyromonas endodontalis: LA319_06725
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Entry
LA319_06725 CDS
T08002
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
pend
Porphyromonas endodontalis
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pend03032
]
LA319_06725
03036 Chromosome and associated proteins [BR:
pend03036
]
LA319_06725
03400 DNA repair and recombination proteins [BR:
pend03400
]
LA319_06725
DNA replication proteins [BR:
pend03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LA319_06725
Chromosome and associated proteins [BR:
pend03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LA319_06725
DNA repair and recombination proteins [BR:
pend03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LA319_06725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
PqqD
HTH_29
NirdL-like_HTH
DUF2267
RecA-like_ORC2
Motif
Other DBs
NCBI-ProteinID:
UBH64229
LinkDB
All DBs
Position
complement(1598846..1599136)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKADLVAQIAKRTGLDRDEVLRTVETFMDVVKDEMAQGNNIYLRGFGSFVIRERAQKIA
RNISKKEAIIIPKHNVPSFKPSKVFSEMLGGTEIKK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaccttgtggctcagatagctaagagaacaggattagatcgtgacgaa
gtattgcgtaccgtagagacttttatggatgttgtcaaggatgagatggctcagggcaac
aatatctatctcagagggtttgggagttttgttattagagagagagctcagaagatagct
cgcaacatctcaaagaaggaggctattattatcccgaagcacaatgttcccagcttcaag
ccttctaaagttttctctgagatgctagggggaacagagatcaagaaataa
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