Porphyromonas endodontalis: LA319_08085
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Entry
LA319_08085 CDS
T08002
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pend
Porphyromonas endodontalis
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pend03032
]
LA319_08085 (topB)
Enzymes [BR:
pend01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LA319_08085 (topB)
DNA replication proteins [BR:
pend03032
]
Prokaryotic type
DNA Topoisomerases
LA319_08085 (topB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
DUF3945
Motif
Other DBs
NCBI-ProteinID:
UBH64472
LinkDB
All DBs
Position
1914769..1916850
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AA seq
693 aa
AA seq
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MTTCIIAEKPSVARDIARIVGANSRQDGYLEGNGYFVTWAMGHLIALAMPEAYGFTAYKA
EDLPIRPNPFQLIVRQVRKDKEYISDPAALKRLKIIRSCFDRADRIIVATDAGREGELIF
RWIYAHLGCRKPFYRLWISSLTDKAIREGMANLKSGNNYENLYHSAQARAEADWLVGINA
SRALSIARRGGYSLGRVQTPTLAMVCRRYIENRDFSSAPYWKLSAFTEKDGMSLKAIGVI
DYESEASAQTALAALRSQSRLTIESVTRKVGHTSPPLLYDLTALQKEANRCHGFSADKTL
SIAQSLYEKKITTYPRTGSRYISEDVFEEVPVLLRKIGKTLSNPLNRHSVDNDKVTDHHA
IIPTGETPQGLSADEVTVYQMVVTRFVEAFSPDSEEERVQVQFTDDTNIFTWKACRQISL
GWKAVQKNKATETEEKEDGDEQVLSSLPNLPEGEVLPLVDAEITEHKTKPKPLYTEATLL
SAMENAGREVEDAESKKAMAECGIGTPATRANIIETLILRDYIRREKKAIVPTEKGLAVY
EIVKDKKIANAEMTGSWELALAAIEAGQMPPERFAQGINSYISTICEELLSLASEQKSYP
TYRCPECGSESVGIYAKVAKCRNKDCNFHVFREVCGTLLSEDNIRDLLTTGRTPILNGLT
SKAGKKFNARLVLNEDYTTSFEFENKKGKQRGR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttgtattatcgccgagaaaccctcggtagccagagacattgcccgtatcgta
ggggcaaacagcagacaggacggatatttagagggtaatggatattttgttacttgggca
atgggacatctcattgcccttgccatgcccgaagcctacggttttacagcctataaagcg
gaagacctgcccatccgtcccaatcctttccaattgatcgtccgccaagtgcgcaaggac
aaggagtatatatccgacccagcggcattaaagcggctcaaaatcatccgaagttgcttc
gacagagctgaccgtatcatcgtagccaccgatgcaggcagggagggtgaactgatattc
agatggatttatgcacatctgggttgccgaaagcctttctaccgcctttggatttcctcg
ctcacggacaaagctatccgtgagggcatggcaaatctcaagtcaggcaacaactacgag
aacttgtatcactctgctcaagcgagagcagaagccgactggctcgtgggcatcaatgcc
agccgtgccctgtccattgcccgcaggggcggttattccttgggacgggtgcagaccccg
acactggctatggtctgccgtcggtacatagagaaccgtgatttttcttccgcaccctat
tggaaactttctgctttcacagagaaagatggcatgtcgctgaaagccattggtgttatc
gactacgagagtgaagcatcggcacagactgctctcgctgcactccgcagtcagagccgg
cttacgatagaatcggtcacaagaaaggtgggacatacgtcgccacccctcttgtacgac
cttactgccttgcagaaagaagccaacagatgccacggcttttcagcggacaagaccctc
tcgatagctcaaagcctctatgagaagaaaatcacgacctatccccgtacaggcagccga
tacatcagtgaggatgtctttgaggaagtacccgtcctgctccgcaagataggcaagacg
ctatccaatccacttaaccgccattcggtggacaatgacaaagtaaccgaccaccacgcc
atcatcccgacgggcgaaacaccgcagggcttatcggcagacgaggtgactgtctatcag
atggtagtaacccgctttgtcgaagccttttctcccgattccgaggaagagcgtgtgcag
gtgcagttcacggacgacaccaacatctttacttggaaagcctgccgacaaatctccttg
ggctggaaagcggtgcagaaaaacaaggcaaccgagacagaggagaaagaagacggcgat
gaacaggttttgtcttcattgcccaacttgccagaaggagaagtcctgccacttgttgat
gcagaaatcaccgaacataagaccaagccaaagcctctctatacagaggcaacgctcctc
tctgcaatggagaatgcaggaagagaggttgaggatgcagagagcaagaaggcaatggcg
gagtgcggtatcggcacacctgccacaagagccaacatcatcgagacgcttatcctccgt
gattacatccgcagagagaagaaagccattgtcccaacagaaaaaggcttggcagtctat
gagattgtcaaggacaagaagattgccaatgcggagatgacaggcagttgggaactggct
cttgccgctatcgaggcaggtcagatgccgcccgaaaggtttgcacaaggtatcaactcc
tatattagtaccatctgcgaggaactgctctcgcttgcttccgaacagaagtcttaccca
acctaccgctgtcccgagtgcggcagtgagagcgtgggcatctacgccaaggtagccaag
tgcagaaacaaggactgcaacttccatgttttccgcgaagtctgcggcacgctgctctcc
gaggacaatatccgggacttgctgaccacaggtcggacacccattctcaatggcttgacc
agcaaggcaggcaagaagttcaacgcccgtctggtactgaatgaagactataccacatcc
tttgaatttgaaaataagaaaggaaaacaacgagggagataa
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