Porphyromonas endodontalis: LA319_08830
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Entry
LA319_08830 CDS
T08002
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pend
Porphyromonas endodontalis
Pathway
pend03030
DNA replication
pend03430
Mismatch repair
pend03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pend00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA319_08830
03430 Mismatch repair
LA319_08830
03440 Homologous recombination
LA319_08830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pend03032
]
LA319_08830
03400 DNA repair and recombination proteins [BR:
pend03400
]
LA319_08830
Enzymes [BR:
pend01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA319_08830
DNA replication proteins [BR:
pend03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA319_08830
DNA repair and recombination proteins [BR:
pend03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA319_08830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
UBH64609
LinkDB
All DBs
Position
complement(2095688..2096731)
Genome browser
AA seq
347 aa
AA seq
DB search
MATSTPSLSQSYHQLVKSFSSGKELPPLLFLGGEESYYIDRLVELLAEHYLPREEWALSR
TILYGSELSLPELRDTILSSSLLGGRRLYIIREVNAIKGLDEIVEAIPSIQPETTVVLCY
NGDPERAARSLLKRLTEAQVPLFLSPKMRNSRDTASLIRDAADLLHITVEPDAMGALYDF
IGTNGATLYSELRKLAVLASGRGGMVTRAMVEQNVGISREYSPYELLNALVAKQRAKAYK
LARYMALNEKRYPLPIILSTLYTYFANLMIVMYQPRNISADDVAKVLGLRNSYAAESYMT
GKWAFTPMQVFNIVHEIRMTDARFKGAEGGAYTNDGLLIDLVTFILG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctctactccctctctctcgcagagttaccaccagcttgtaaagagcttctct
tcgggcaaagagcttccccctcttctctttttgggaggggaagaatcgtactatatagat
agacttgtggagctacttgccgagcattacctgcctcgtgaggagtgggctttgagtagg
actatcctctacggatcggagctctctctccccgagctgagggataccatcctttcctcc
tcgctgctgggagggcgtcgcctttacattatacgagaggtaaatgccatcaaagggttg
gatgagattgtggaggcaataccttcgatacagcccgagactacggttgtactttgctat
aatggagatcccgagcgtgctgctcgttcccttttgaagcgtctcaccgaggctcaagtg
cccctattcttatcccccaaaatgcggaatagtcgggatacagcatcgctaatccgtgat
gctgctgacctacttcatatcaccgtagagcctgatgctatgggggctctctacgacttt
attggtaccaatggtgctaccctttatagtgaactacgcaagcttgccgtactcgcctcg
ggcagagggggaatggtaacgcgcgccatggtggagcagaatgtggggattagtcgcgag
tattctccctatgagctcctcaatgctctggtagctaagcaacgagccaaagcctacaaa
ttggcgcgctatatggcgcttaatgagaaacgctaccccttgcccatcatcctatctacc
ctgtatacctactttgccaacctgatgattgtaatgtaccaaccgcggaatatctctgcc
gatgatgtggctaaggtattgggcttacgcaactcgtacgctgcggagagttacatgacg
gggaagtgggcttttacccctatgcaggtattcaacatcgtgcacgagatccgtatgacc
gatgcacgatttaagggggcagagggaggagcctatacgaatgatggtttgcttatcgac
cttgtaacctttattctagggtga
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