Pedobacter sp. PACM 27299: AQ505_00065
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Entry
AQ505_00065 CDS
T04140
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep03030
DNA replication
pep03430
Mismatch repair
pep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AQ505_00065
03430 Mismatch repair
AQ505_00065
03440 Homologous recombination
AQ505_00065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pep03032
]
AQ505_00065
03400 DNA repair and recombination proteins [BR:
pep03400
]
AQ505_00065
Enzymes [BR:
pep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AQ505_00065
DNA replication proteins [BR:
pep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AQ505_00065
DNA repair and recombination proteins [BR:
pep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AQ505_00065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ALL04024
LinkDB
All DBs
Position
complement(25573..26721)
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AA seq
382 aa
AA seq
DB search
MQFKDIIGQEEIKAQLVQTVVENRVSHAQLFLSTEGSGALPLAIAYAQYINCLDKQDNDS
CGACSSCRKYERYIHPDLHFSYPFFASKDARIAVDVIDEWRSMLLEDPYFDMDIWRSKLN
AENKQANINIAECHDIIKKLSYKAFEGETKVLIMWLPEYLDREGNSLLKIIEEPPANTLF
LLVANNQEQILSTLLSRTQIVKIPKLSHETIENYLTEKHGMPEEQATEYSFLADGNLIEA
KLLLANTQNGNADKFAEWLRMGYGNRVLELTTFVDQAAGWGRENQKNFLKYGINFLRECS
LLLSDAEVLVKLPARTLDTAKKLSEKVLDLPMAEAIIQELERAHYHIERNANPKILFLDV
SLQLVKIIKFKTLPKGTQYIYN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaaagacatcatcggacaggaagagattaaggcacagttggtacaaaccgtt
gtcgaaaacagggtgagtcatgcccagttatttctgtctactgaagggagtggtgctctg
cctctggcaatcgcctacgcacaatacatcaattgcctggataagcaggataatgatagc
tgtggagcctgttcatcctgtcggaagtacgagcgatatatccatccagacttgcatttt
tcctatccttttttcgcttctaaagatgccagaattgctgttgatgtgatcgacgaatgg
cgcagtatgctgctcgaagatccttattttgacatggacatctggcgttcaaaactgaat
gcggagaataaacaggccaacatcaacattgccgaatgtcatgacattataaaaaagctg
agttataaagcttttgaaggagagacgaaggttttgatcatgtggctgccagaatacctg
gatcgtgaggggaattctttgttgaaaatcattgaagaaccacctgcaaacactttattc
ctgttggtggcgaataaccaggagcagatcttatcaaccttgctgtcgcgtacgcaaatt
gtgaagattccgaagttatcacatgaaacaattgaaaattacctgaccgaaaaacacggc
atgccggaagaacaggctacagaatatagctttctggcggatggaaatctgattgaagcc
aagctgttactggccaatactcaaaatggcaatgctgataaatttgccgaatggctgagg
atgggttatggcaaccgcgtgttggaactgactacttttgtggatcaggctgccggttgg
ggaagagaaaatcaaaagaattttttaaaatatggaattaattttctgcgggaatgcagt
ctgctgctcagtgatgcagaagtactggtgaaactgcccgcaagaacattagataccgca
aaaaagctgagcgaaaaggtattagatttaccgatggcggaggccattatccaggaactg
gaacgcgctcattaccatatcgaaaggaacgctaaccctaaaattctgtttttagatgta
tctttacaattggtaaaaataattaagtttaaaacgctcccgaaagggactcaatatata
tacaattaa
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