Pedobacter sp. PACM 27299: AQ505_01090
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Entry
AQ505_01090 CDS
T04140
Name
(GenBank) transcription accessory protein
KO
K06959
protein Tex
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
AQ505_01090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_6
HHH_2
DUF3006
DUF3106
Motif
Other DBs
NCBI-ProteinID:
ALL04211
LinkDB
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Position
268694..271006
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AA seq
770 aa
AA seq
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MSHHSKIIATELGVAEKQVVATIELLDAGATVPFISRYRKEVTGSLDEVQVAAVRDRFQQ
LRELDKRREAILKALTALDKLSPELERQINEASDITTIEDIYLPYKPKRKTRASEARKKG
LEPLALTLLEQGKGDPDSEAQAFLNEELGVNSTEEALAGARDIIAEIVNEHVELRTSMRQ
YFQQKSSFKSSVMKGKEEEGIKYKDYFDWEEPLKAAPSHRVLAMRRGENEAILKLETMPE
EEGAISIIEGQFIKGNSAATKQVKMAIQDSYKRLLGPAMETEIRSFSKEKADAEAIRVFA
ENARQLLLAAPMGQKNVLAIDPGFRTGCKVVCLDRQGKLLENTAIYPHTGQGNVKNAADK
MIELCKKYQVEAIAIGNGTAGRETEVFIRGLQISEVTIVMVNENGASIYSASDVAREEFP
TQDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQSKLQQSLDDTVMSCVNAV
GVELNTASKQVLAYVSGLGPQLAQNIVTYRNENGAFKNRDSLKKVPRLGDKAYEQAAGFL
RIRDAEQILDASGVHPERYALVNKMARDLNCSVAQLVKDAELRKQIKLQQYVTEEIGLPT
LNDIMNELAKPGRDPREQFEAFSFTDGVNEIADLRIGMKLPGIVTNITNFGAFVDIGVHQ
DGLVHTSQLADRFVANPNDVVKVHQKVEVTVVEVDAARKRISLSMKSGEAKPKVKAVGKP
EERSKTFHKPVNKNPAGNRPKPIQKSEQKGKAQPEGDLQLKLEALKSRFK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcattctaaaataattgctaccgagcttggcgtagctgaaaaacaggttgtt
gcaaccatcgaattgttagatgccggtgcaactgtaccatttatttcccgctatcgtaag
gaagtgaccggaagtttagatgaagtacaggtagcggcagtccgcgatagatttcaacag
ctgcgtgagctggacaaacgtagagaagccattcttaaagccttgaccgcattggataag
ctgagtccggaattggaacgtcagatcaatgaagccagcgatatcaccacaattgaagac
atttaccttccttataaacctaagcgtaaaacgagagcttctgaagctagaaagaaaggt
ctggagccattggcgcttacactgctggaacaaggtaaaggtgatccggattcggaggct
caggccttcttaaacgaggaactgggggtaaattcgacagaggaagccctggcaggtgca
agagacatcattgcagaaattgtgaatgagcatgtagagctgaggacctcaatgcgtcag
tattttcagcagaaatcttcttttaaatcttctgtaatgaagggtaaagaagaagaagga
atcaagtataaagattatttcgactgggaagagccgcttaaggcagcaccatcacatcgt
gttttggccatgagaagaggagaaaatgaagcgattttgaaactggaaacgatgccagaa
gaagaaggcgcaatttctatcattgaaggacaatttattaaaggcaattctgcagcgacg
aaacaagtgaaaatggccatccaggattcttataagcgtcttttggggccggctatggaa
actgaaatccgatctttctcaaaagagaaagcagatgcagaagctatccgcgtgtttgca
gaaaatgccagacaattattattggcggcgccgatggggcagaaaaacgtgctggcaatt
gatcctggattccgtaccggatgtaaggtggtttgtttggaccgacaaggaaaactatta
gaaaatactgcgatatacccacataccggacaagggaatgtgaaaaacgcagcagataag
atgatagagctttgcaagaagtatcaggtagaagccattgccattggtaatggtactgcg
ggtagggaaacagaggtgtttatccgtggtttacagatttctgaggtgactattgtgatg
gtcaatgaaaacggagcttctatttattccgcttcagatgtggcccgtgaggagtttcct
acacaggacattaccgttcgtggagcagtttctatcggaagaaggctgatggatccgtta
gcagaattggtgaaaatcgatcctaaatctattggggtggggcaataccagcatgatgta
gaccagagtaaattacagcaatcgctggatgatacggtaatgagttgtgtgaatgcggta
ggggttgagttaaatacagcctctaaacaggtattggcctatgtttctggtttaggtccg
caattggcacaaaatattgtgacttatagaaatgaaaacggcgcgtttaaaaatagagat
agcctgaaaaaagtccctcgtttaggtgataaggcctatgagcaggctgcgggtttctta
aggatcagggatgcagagcagattttggatgccagtggcgttcacccggagcgttatgca
ttggtgaataagatggcgagagatttaaattgcagtgttgcacagctggtaaaagatgca
gagttaagaaaacaaatcaaactgcagcaatatgtaactgaggaaattggtctgccgact
ttaaacgacatcatgaatgaattggcgaaaccagggagagatccaagggaacagttcgag
gctttcagttttacggatggtgtgaatgaaatcgctgatttaagaatcggtatgaaactt
ccgggaattgtgaccaatattaccaatttcggtgcttttgtggatataggcgttcatcaa
gatggattggtgcataccagtcagctggcagatcgttttgtagcgaaccctaatgatgtg
gtcaaagtacatcaaaaggtggaggtgacggtggtagaggttgatgcggcaagaaaacgc
atttccttatccatgaaatcaggagaagctaagccaaaggtgaaagcagtaggaaaacct
gaagagcgctcaaaaactttccataagccagttaataaaaatcctgctggcaataggcca
aaacctattcagaagtctgaacaaaaagggaaggctcagccagaaggtgatttacagttg
aaactggaagctttgaaaagcaggtttaaataa
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