Pedobacter sp. PACM 27299: AQ505_03460
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Entry
AQ505_03460 CDS
T04140
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pep03009
]
AQ505_03460
Enzymes [BR:
pep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AQ505_03460
Ribosome biogenesis [BR:
pep03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AQ505_03460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_25
PabTrmU54_TRAM_dom
PrmA
Motif
Other DBs
NCBI-ProteinID:
ALL04633
LinkDB
All DBs
Position
822314..823822
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AA seq
502 aa
AA seq
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MSRNRKSGTVTIIPNLSIIDIAEEGKGVGKADELVVFVDKAVPGDVVDVRVVKKKKNFAE
AVIEAIHVKSELRTDAFCQHFGTCGGCKWQHMDYSAQLTFKQKNVEAALQRLAKIDISSM
EPILGSAENKYYRNKLEYTFSNKRWLNKADMPVIADAEASADEHAVVEEIASPEKAEMEM
NALGFHVPLRFDKILDIEHCYLQAEPSNTLRNKVRSYALENGISFYDLRNHEGALRNLII
RTSSTGEVMVVVVFAYVEQAQVDGMMEYLKVNFPEVTSLLYIINQKKNDTIFDQEVITYA
GRDHIFEEMNGLKFKIGAKSFYQTNSLQAFELYKITKEFAGFSGDELVYDLYTGAGTIAN
FVAGSVKQVIGVEYVPTAIEDAKFNSNLNGINNTTFYAGDMKDILTTDFIAAHGKPDVVI
TDPPRAGMHADVVARLLEMEAEKIVYVSCNAATQARDLALLKEKYEVVRIKPVDMFPHTQ
HVENVVLLKFTGLTTVEVAEAN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaatagaaaatccggaacggtaaccattatccccaatttaagtattattgat
attgccgaagaaggcaagggagtaggtaaagcagatgagttggtggtatttgtggataaa
gccgtacccggcgatgtcgttgatgttcgtgttgtaaaaaagaaaaagaatttcgctgag
gccgtaattgaggctatacatgtgaaatctgagttgagaacggatgcattttgtcagcat
tttggtacttgtggcggctgcaaatggcagcacatggactatagtgctcaattgacattt
aaacagaaaaatgtagaagccgctttgcaaaggctggctaaaattgatatctcctccatg
gagccgattttaggatcagcagagaataaatactatagaaataaattagaatataccttt
tcaaataaacgctggctaaataaagcagatatgccggtgattgcagatgctgaagcttca
gctgatgagcatgctgtagttgaagagatcgcttccccagaaaaagcggaaatggaaatg
aatgctttaggtttccacgttcctttgcgttttgataaaatattagacattgagcattgc
tatttacaggcagaaccttccaacactttgagaaataaagtgagaagttatgctttggaa
aatggaatcagcttctatgatctgcgtaaccatgaaggtgctttaagaaacctgatcatc
cgtacctcttctacaggtgaagtaatggttgtggtggtgttcgcatacgtggaacaagca
caggtagatggtatgatggaatacctgaaagtgaacttccctgaagtgacttctctttta
tacatcatcaaccagaagaaaaatgatactattttcgatcaggaagtaattacttacgca
ggaagagaccacatctttgaagaaatgaatggactgaaattcaaaattggtgcgaaatca
ttctatcagaccaactctttacaagcttttgaattgtataagattacgaaagagtttgct
ggtttcagcggagatgaactggtatacgatttatatactggtgctggtacgattgccaac
tttgtagcaggtagcgtgaagcaggtaattggtgttgaatatgtgcctacggcaattgaa
gatgctaaattcaactcgaatttaaacggaatcaacaataccaccttctatgcaggtgat
atgaaagatattttaaccactgattttattgcagcgcatggtaaacctgatgtggtgatc
acagatccaccaagagcaggtatgcatgcagatgttgtagccagattgctagagatggaa
gcagagaaaattgtgtatgtgagctgtaatgcagcgacccaggcaagagatttagccctg
ttaaaagagaaatatgaagtagtacgcatcaaacctgtagatatgttcccgcatacacag
catgttgaaaacgtagtgctgttaaaatttaccggtctgactactgttgaagtagcagaa
gctaattag
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