Pedobacter sp. PACM 27299: AQ505_03920
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Entry
AQ505_03920 CDS
T04140
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pep03009
]
AQ505_03920
Enzymes [BR:
pep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AQ505_03920
Ribosome biogenesis [BR:
pep03009
]
Prokaryotic type
ribosomal protein modification factors
AQ505_03920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALL04707
UniProt:
A0A0P0NC21
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All DBs
Position
928391..929725
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AA seq
444 aa
AA seq
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MNTKTTSKIIPVKKPKINVITLGCSKNLYDSEVLMGQLRGNSMDVVHESDKMGKDDIVVI
NTCGFIDNAKQESIDTILQYSELKDAGKIAKVIVTGCLSERYKPELEAEITNVDAFFGTN
DLNNILHSLGANYKHELIGERLLTTPSHFAYFKIAEGCNRPCSFCAIPLMRGKHVSRDMN
ELVNEAKILAANGTKELILIAQDLTYYGLDIYGKRNLDELLRRLSDVNGIEWIRLQYAYP
SGFPMEILDAMNERDNICKYLDMPLQHITDNMLKSMRRGITKQKTIDIVNQIRDKVPNIA
MRTTLICGYPGETEADFEEMLSWVEDTRFDRLGCFTYSHEEKTHAHDLVDDVPAEVKQER
VDAIMELQQGISYEINQEKIGHTYKVLVDRKEGDFFIGRTEFDSPEVDNEVLIDAKTGYA
ANGSFVNVKIDRAEDFDLYGQIVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaaaccacatctaaaatcattcctgttaaaaaacctaaaatcaatgtcatt
actttgggttgttctaaaaacctgtatgattcagaagttttgatgggtcagcttcgtggc
aatagcatggatgtggtccatgaatccgataaaatgggcaaagatgatattgtagtcatc
aatacctgcggttttatcgacaatgccaagcaagaatcaattgatactattcttcaatat
agcgaacttaaagacgccggtaaaattgccaaagtaattgtaaccggttgtttatctgaa
aggtataagccggaattggaagcggaaatcaccaatgtagatgctttctttggaaccaat
gatctgaacaatatcttacattccttaggtgctaattataagcatgagctgattggagaa
aggttattgaccactccatctcactttgcttattttaaaattgcagaaggctgtaaccgc
ccatgctctttttgtgccattcctttgatgcgtggaaaacacgtttccagagatatgaat
gagttggtaaatgaagcaaaaattttagccgctaacggtacaaaagaattaattctgatt
gcacaggatctgacttattatggtttagacatttacggaaaacgtaacctggacgaattg
ctaagacgtctttctgatgtaaatggaatcgaatggatcaggttacaatatgcttatcct
tcaggtttcccaatggagattctggatgcaatgaacgagcgtgataacatctgtaaatac
ctggatatgcctttacagcatattacagataatatgttgaaatctatgcgtcgtggaatc
acgaaacagaagaccattgatattgtgaaccaaatcagagataaagtgccgaatatcgcc
atgcgtactactttaatttgtggttacccaggtgaaacagaagccgatttcgaagagatg
ctgagctgggtggaagacacgaggttcgatagattaggttgtttcacttattctcatgaa
gaaaaaactcatgctcatgacctggttgatgatgtccctgcagaagtaaaacaggaacgt
gtagatgccatcatggaattacagcaagggatttcttatgagatcaatcaggaaaaaatc
ggtcatacctataaagtactggtagatagaaaagaaggtgatttctttattggaagaact
gaatttgactctcctgaggttgataatgaggttttaattgatgctaaaacaggttatgcg
gctaatggaagcttcgtaaatgtgaagattgacagggcagaagattttgatctatatgga
caaattgtaaaataa
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