Pedobacter sp. PACM 27299: AQ505_04210
Help
Entry
AQ505_04210 CDS
T04140
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_04210
Transporters [BR:
pep02000
]
Other transporters
Pores ion channels [TC:
1
]
AQ505_04210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALL08649
LinkDB
All DBs
Position
1006931..1008943
Genome browser
AA seq
670 aa
AA seq
DB search
MANQSQEIPAVRLKENSYELNEVVITGQYEPQSLRNSVYNVRTISSEMIRLRGATELKNI
LSTELGIRFMTDRPTGISSPELMGVSGAGIKILLDGVPMMDRGTGKESLGQIDINTVERI
EIVEGPMSVIYGTDAMAGVINIITKRGRQDHFSVTARVQEETAGKEYDAFDGKGTHNEFL
GFNWQKNGWNVAASGSRNNFGGWQGNKTGREQEWLPKNQWLTSAAAGYKNGKFDLWYRFN
GADESLKLLGPMTNSPKVSDKEYISKRWFHQLQGSVLVNDKLSIDAAAAYTDYSRRTLST
DLELATGKETLSLEQGAQDLDELGTVFFRGTVQYKISPEMILQPGIEYNRNSGQGGRISG
SPVINDYSFFLSTQWQVNEAIQLKPGFRLTKNSIYKAPPIIPSLHSKIRLNKDLDLRLSY
ARGFRAPMLRELYFYYKDANHDIAGNLDLKAEYSNSFHGSLAWAVKTTPDLRFNTIVSGF
FNDYKNKIDLGLVEGTTNVNTYLNIAKNKTAGGEWNNTLYWKGLQASLGFAYIGQYNMYS
EEKEQLGDTPKYVWTPEINSNISYLVPKINTNISLFYKFTGEKSTYILSQGTGGTTARLS
KMAAFHIADLTLNKTINKYLSINGGVRNLLDVTRIRATGVEEGAHTNDGSNPFGYGRSYF
LGLTMNWAKK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcagtcgcaggaaattcctgcagtccgcttaaaagaaaattcttacgaactt
aacgaagtagtgattactggtcagtacgaaccacaatccttacgaaattctgtttataat
gtccgcacgattagcagtgaaatgatccgtttacggggggcaacagagttgaagaacata
ttaagtaccgagttgggcatccgctttatgacagatcggccaaccggaatcagcagtcct
gagttaatgggtgtatctggtgcagggattaaaatcctgctggatggtgtcccgatgatg
gatcgtggtacaggtaaagaaagtttgggacagattgatatcaacactgtagagcgtatc
gaaattgtagaaggtccaatgtctgtgatttacggaacagatgccatggctggtgtgatc
aacatcattaccaaaagaggcagacaagatcatttttcagtaaccgccagagttcaggaa
gaaactgcgggcaaagaatatgatgcctttgatggaaaaggaacacataatgagttcctg
ggtttcaactggcagaaaaacggctggaatgtggccgcttccggaagccgtaataatttt
ggtggctggcaaggaaataaaaccggtcgtgaacaggaatggttgcctaaaaatcaatgg
ctgacctcggcagctgccggatataaaaatggaaaattcgatttatggtaccgcttcaat
ggagctgatgagagtttgaagcttttaggcccaatgaccaattcacctaaagtatcggat
aaagaatacatttctaaacgctggttccaccaattacagggatctgtattggtaaatgat
aagctgagcatcgatgctgccgccgcttatacagactatagccgccggactttatcaacg
gatttggaactggctacaggcaaagaaacattgtctttagaacagggcgcacaagatctg
gatgaattgggcacagtgttctttagaggtactgttcagtataaaatatcgccggaaatg
attttacagccaggtattgaatataacagaaattctggtcagggcggcaggattagcgga
tcaccagtgatcaatgattattcatttttcttgtccacacaatggcaggtaaatgaagcc
attcaattgaaacctggtttcaggctgactaaaaactccatctataaagcgcctccaatt
attccttccttacattcaaaaatcagattgaataaagaccttgaccttcgtttatcgtat
gcacgaggctttagggcacctatgcttagagagctttatttttactacaaagatgccaac
cacgacatcgccggtaacctggacctgaaagcagaatactccaatagttttcatggctct
cttgcctgggctgtaaaaacgactccagatctgcgcttcaatacgattgtgagtggcttt
tttaacgactataaaaacaaaattgatctaggactagtggaaggaaccacgaatgtaaat
acctacctcaacattgctaaaaataaaactgctggcggggaatggaacaataccctgtac
tggaaaggcttacaggcaagtttaggatttgcttatatcggccaatacaatatgtattcg
gaagaaaaagagcaattgggtgatactccgaaatatgtatggacgccagaaattaattcc
aatatctcttatctcgtaccaaaaatcaatacgaatatcagtttgttctataagttcact
ggcgagaaatcgacctatatattaagccagggtaccggcggtactactgcaaggctatcg
aaaatggctgcttttcatatcgcagacctgactttaaataaaaccattaataaatacctg
agcattaacggaggagtaagaaacctgttagatgtgaccagaatccgcgctactggtgta
gaagagggtgcacatacgaatgatggcagcaatccatttggctatggacgttcttacttc
ctgggattaacaatgaactgggctaaaaaataa
DBGET
integrated database retrieval system
