Pedobacter sp. PACM 27299: AQ505_07090
Help
Entry
AQ505_07090 CDS
T04140
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep03030
DNA replication
pep03430
Mismatch repair
pep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AQ505_07090
03430 Mismatch repair
AQ505_07090
03440 Homologous recombination
AQ505_07090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pep03032
]
AQ505_07090
03400 DNA repair and recombination proteins [BR:
pep03400
]
AQ505_07090
Enzymes [BR:
pep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AQ505_07090
DNA replication proteins [BR:
pep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AQ505_07090
DNA repair and recombination proteins [BR:
pep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AQ505_07090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GPHH
Motif
Other DBs
NCBI-ProteinID:
ALL05276
LinkDB
All DBs
Position
1648042..1648515
Genome browser
AA seq
157 aa
AA seq
DB search
MEHNFTAIDFETAHGKRWSICQVGLVRVENGIVKETINRLVCPPDNIYFYRNIEVHGITP
ERTRRSPNFSAVWREISSFIDGQTVVAHNGAFDFSCLAQTLDYYQIAQPVYDKQCTYKIY
KQKLAALCQEYRIPLNHHDALSDALACAELYKMHLNK
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaattttacagcaattgattttgaaactgctcatggtaaacgctggagtatt
tgtcaggtaggtctggtacgcgttgaaaatggaatcgttaaagaaacgattaataggtta
gtttgtccgccagataacatctatttctacaggaatattgaagtacatgggatcactcct
gaacgtacacgcagatctccgaatttttcagcagtatggagggagatttcttcatttatt
gacggacaaacggtggtggcgcataatggtgcttttgatttcagctgcctggcgcagacc
ctggattattaccagatcgcacagccggtatatgataaacagtgcacctataaaatttac
aaacaaaagttagcggctttgtgtcaggaatatcggattccattgaaccatcatgatgcg
ttgagcgatgcattggcctgtgccgaattgtataaaatgcatttaaacaaataa
DBGET
integrated database retrieval system
