Pedobacter sp. PACM 27299: AQ505_09205
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Entry
AQ505_09205 CDS
T04140
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pep03016
]
AQ505_09205
Enzymes [BR:
pep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AQ505_09205
Transfer RNA biogenesis [BR:
pep03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AQ505_09205
Prokaryotic type
AQ505_09205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ALL05652
UniProt:
A0A0P0NEQ9
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All DBs
Position
2196435..2197346
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AA seq
303 aa
AA seq
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MKFEVTILGSSSATPVYNRNPSAQLLNCNEKFYLIDCGEGTQQQLIRFGFKASKIDVVFI
SHLHGDHYFGLIGLLSTMHLNGRIKPIRIYGPPALMEILELQFKHSETIIRYPIEFTPIT
ADVPKLIFENSDLLVSTIVLNHRIPCTGFTFTEKKRLRKVVLEKLEAENVPLEYYPLLKR
GVDLTLPDGRVLLNKDYTVDSDKPRKYAYCSDTLCDGSYFEEIKNCDTLYHEATFLHELL
ERANQTHHTTALQAAETALNTGATKLLIGHFSSRYKTLLPLLEEALPVFENTQLATEGST
FSI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaggttaccattttgggcagcagctctgctaccccagtatacaatagaaat
cccagcgcacagcttttaaactgtaatgagaaattttacctgattgattgcggggaagga
acccagcagcaattgattcgttttggcttcaaagccagtaaaatcgatgtggtattcatt
agccatttacatggagatcattattttggattgattggcttactgtctacgatgcacttg
aacggaaggatcaaacccatccgcatctatgggccgccagctttaatggaaattctggaa
ctccagtttaaacattctgaaacaatcatcaggtatcctatagaatttacgccaattacc
gcagacgtacccaagctgattttcgaaaactcagatctgctcgtttccaccattgtgctc
aaccatagaatcccatgtactggatttacctttacagagaagaaaagattgcgcaaagtt
gtactcgaaaaactagaggctgaaaatgttccactggaatattatcctttgttaaaaaga
ggggtagacctgactttacctgatggtagagtgctgctcaacaaagattatacggtagat
tccgacaagccaaggaaatacgcctattgctcagatacactttgcgatggcagttacttt
gaagagatcaaaaattgtgatacgctgtatcatgaggcaactttcttgcatgagttgttg
gaaagagccaatcaaacacaccatactactgcattacaagccgctgagacggccctaaac
accggagcgactaaattactcattgggcatttctcgtccaggtacaagacgctgctgcca
ttgctggaagaagccctgcctgtttttgaaaatacgcagctggccacagaaggcagtact
ttctctatttaa
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