Pedobacter sp. PACM 27299: AQ505_09360
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Entry
AQ505_09360 CDS
T04140
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep03030
DNA replication
pep03430
Mismatch repair
pep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AQ505_09360
03430 Mismatch repair
AQ505_09360
03440 Homologous recombination
AQ505_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pep03032
]
AQ505_09360
03400 DNA repair and recombination proteins [BR:
pep03400
]
AQ505_09360
Enzymes [BR:
pep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AQ505_09360
DNA replication proteins [BR:
pep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AQ505_09360
DNA repair and recombination proteins [BR:
pep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AQ505_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
His_Phos_1
Motif
Other DBs
NCBI-ProteinID:
ALL05681
LinkDB
All DBs
Position
2239356..2240345
Genome browser
AA seq
329 aa
AA seq
DB search
MKLNLNRPLAFFDLETTGVNVGADRIVEIAILKAMPDGTEQIKTMRINPEMPIPLASSLI
HGIYDKDIANEPTFKEVAAELAEFIGDADLAGYNSNRFDIPVLLEEFLRAGVDFDMSDRK
FVDVQNVFHQMEQRTLRAAYKFYCDKDIVNAHSAEADITATYHVLLAQIERYKDTEFEDK
QGNISKPVQNDVDALHTFTNMNKPVDFAGRMVFNEQGQETFNFGKHKGKTVEQVFDTEPS
YYAWMRQGDFPLYTKKKLEEIWSRWNKKKEQLKQEKQQQTVVNKPKPAVNSGASNVVKPA
AAAPQQKKPKPAVEVTNDMLEQLKMKFGK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatttaaaccgccctcttgctttttttgatctggaaactacaggtgttaat
gtaggtgcagatcgcattgttgaaattgccattttaaaagctatgcccgatggtacggag
caaatcaaaacgatgcgcatcaatcctgaaatgccgattcctttagcttcttccctgatt
catgggatttatgataaggatattgctaatgaaccaacctttaaagaggtagccgctgaa
ctggccgagtttattggcgatgctgatcttgcaggttacaattccaacagatttgacatt
ccggtattactggaagagtttttaagagcaggagtagattttgatatgtctgacagaaaa
tttgttgacgtacagaatgtttttcaccaaatggaacaacgcaccttacgtgctgcatat
aagttttattgcgataaagatattgtaaatgcacactctgctgaggcagatattaccgct
acttaccatgtattgcttgcgcagattgagcgctataaggatacagagtttgaagataaa
caagggaatatctctaaaccggttcagaatgatgtagatgcgctacatactttcacaaat
atgaacaaaccagtagattttgctggcagaatggtatttaatgagcaaggacaagagact
tttaactttggtaagcataaaggtaaaactgtggaacaggtttttgatactgagccaagt
tattatgcctggatgagacaaggagattttcctttatataccaagaaaaagttagaagag
atctggtccagatggaataagaaaaaggaacagctgaaacaggaaaaacaacagcaaacg
gtagtgaataagcctaagccagctgtaaattctggagcaagcaatgtagttaaacctgca
gcagcagccccacagcaaaaaaagcctaagccagcagttgaagtaactaatgacatgctg
gaacaactgaaaatgaaattcggtaaataa
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