KEGG   Pedobacter sp. PACM 27299: AQ505_09480
Entry
AQ505_09480       CDS       T04140                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pep  Pedobacter sp. PACM 27299
Pathway
pep02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pep00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AQ505_09480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pep03021]
    AQ505_09480
Transcription machinery [BR:pep03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AQ505_09480
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE Sigma70_ECF HTH_24 HTH_11 ARM_TT21_2nd OB_DEPS-1_2nd HTH_23
Other DBs
NCBI-ProteinID: ALL05701
LinkDB
Position
2261395..2261982
AA seq 195 aa
MLQPNAFNDQDLVALLKTDEQVALKCIYDKYWENLYLAAFNIIRDEAQSKDIVQDVLLQM
WIRRNDVAILTLKSYLFSAVRYKVLTHIKCADNRKVFVEPGELEQLAGSTELSDRLNEHD
INEILEQVVVTLPGRCREIFLLSRKQFLSNKQIGERLGISVKTVENQMTIALKHLRAAMN
EYLFWACLLFEIGIR
NT seq 588 nt   +upstreamnt  +downstreamnt
atgctacagccaaatgcattcaacgaccaggatctagtcgcgttattaaaaacggacgaa
caagttgcacttaagtgtatttatgataaatactgggaaaatttatatctggctgccttt
aacatcataagggatgaagcccaaagtaaggacatagtccaggacgtcttgttgcaaatg
tggatacgcagaaacgatgtggcgatcttaacgctgaaatcttacctgttttcagcggtg
cgttataaagtactaacccatattaaatgtgcagacaaccgtaaggtctttgtggaacca
ggtgagcttgaacagctggcgggtagcacggagttgtcagatcgtttgaatgaacacgat
attaatgagatacttgaacaagtagttgttactttgccagggcggtgccgggaaattttt
cttttgagcagaaagcaattcctcagtaataaacagattggagagcgcttgggaattagt
gtgaaaaccgtagaaaaccagatgacaattgcgctaaagcaccttcgtgcagccatgaat
gaatatcttttctgggcatgcctgctctttgaaattggcatcagataa

DBGET integrated database retrieval system