Pedobacter sp. PACM 27299: AQ505_09480
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Entry
AQ505_09480 CDS
T04140
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQ505_09480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pep03021
]
AQ505_09480
Transcription machinery [BR:
pep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQ505_09480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Sigma70_ECF
HTH_24
HTH_11
ARM_TT21_2nd
OB_DEPS-1_2nd
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALL05701
LinkDB
All DBs
Position
2261395..2261982
Genome browser
AA seq
195 aa
AA seq
DB search
MLQPNAFNDQDLVALLKTDEQVALKCIYDKYWENLYLAAFNIIRDEAQSKDIVQDVLLQM
WIRRNDVAILTLKSYLFSAVRYKVLTHIKCADNRKVFVEPGELEQLAGSTELSDRLNEHD
INEILEQVVVTLPGRCREIFLLSRKQFLSNKQIGERLGISVKTVENQMTIALKHLRAAMN
EYLFWACLLFEIGIR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgctacagccaaatgcattcaacgaccaggatctagtcgcgttattaaaaacggacgaa
caagttgcacttaagtgtatttatgataaatactgggaaaatttatatctggctgccttt
aacatcataagggatgaagcccaaagtaaggacatagtccaggacgtcttgttgcaaatg
tggatacgcagaaacgatgtggcgatcttaacgctgaaatcttacctgttttcagcggtg
cgttataaagtactaacccatattaaatgtgcagacaaccgtaaggtctttgtggaacca
ggtgagcttgaacagctggcgggtagcacggagttgtcagatcgtttgaatgaacacgat
attaatgagatacttgaacaagtagttgttactttgccagggcggtgccgggaaattttt
cttttgagcagaaagcaattcctcagtaataaacagattggagagcgcttgggaattagt
gtgaaaaccgtagaaaaccagatgacaattgcgctaaagcaccttcgtgcagccatgaat
gaatatcttttctgggcatgcctgctctttgaaattggcatcagataa
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integrated database retrieval system