Pedobacter sp. PACM 27299: AQ505_09905 Help Entry AQ505_09905       CDS       T04140                                  Name (GenBank) pectate lyase   KO K01728   pectate lyase [EC:4.2.2.2] Organism pep  Pedobacter sp. PACM 27299 Pathway pep00040   Pentose and glucuronate interconversions pep01100   Metabolic pathways pep02024   Quorum sensing Brite KEGG Orthology (KO) [BR:pep00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     AQ505_09905  09140 Cellular Processes   09145 Cellular community - prokaryotes    02024 Quorum sensing     AQ505_09905 Enzymes [BR:pep01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.2  pectate lyase      AQ505_09905 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pectate_lyase_4 Beta_helix Motif Other DBs NCBI-ProteinID:  ALL05779 UniProt:  A0A0P0NFS1 LinkDB All DBs Position 2370636..2372036 Genome browser AA seq 466 aa AA seqDB search MERLKEKLKKVCVLSLLLSTILTFSQCKKEGMRPADSGNPLSNETPGVLDSQLVSGSASG TMQLNVATGTSDGGFSLRIPMDAKLTSDSNEKPTASTVRVFENGVEIGPGHSSHDDIRTQ GKGRFSHKSNFLFLSASDNSDPKTNGKKYTYTVNGQGGATLDPTPPTTEQPTAPVAGNEP IGYASVNGKTTGGAGGQTLTVTTLDALKSALSSKSPLIIQVSGTITGTGLLQVESNKTIL GLSGSKLIGAGLLIYGKNNVIVRNMTISKVRTYSNIIIKEGAHHVWVDHCDLGSELVSDW DYYDGLLDVGTGADYVTLSWNKLHDNHKAMLIGFSYTRPDDANHLKVTVHHNLFSNISER TPDVRYGNVHVFNNYMLNAGYVGSLMGATVRVENNYFKGSSLPIRTEISPVAGVISGLST NIFESSGSNKITSAPSTWVPTYEYKSALDAAANVPAILTKSAGATL NT seq 1401 nt NT seq  +upstreamnt  +downstreamnt atggaaagattgaaagaaaaattaaaaaaagtgtgtgtgttaagtttattgttatcgaca attttaacgtttagtcaatgtaaaaaagaggggatgagacctgcggactctggcaacccc ctcagtaatgaaacccctggagtgttagattctcaattggtgagtggatcggcttcagga acaatgcaactgaatgtcgctaccgggacttctgatggaggtttttctttaaggattcca atggatgctaaactaaccagcgattctaatgagaaaccaacagcttctacagttagagtc tttgaaaatggagtagaaattggcccaggtcactcttcacatgatgacatcagaactcag ggaaaaggccgtttcagccacaaatcaaatttcctgtttttatcagcctctgataactca gatccaaaaacaaacggtaaaaagtatacctatactgtaaacggacagggtggcgctact ttagacccaactccgccaactacggagcagcctaccgccccagtggctgggaatgaacct attggttatgcttcagtgaatgggaaaactacaggtggtgccggcggacaaacccttacg gtaactactttggatgcacttaaaagcgctttaagttctaaatcacctttgattatccag gtgtctggaacgattacaggtacaggtttgcttcaggtagaatctaacaaaacgattttg ggccttagcggatctaagctaattggtgcgggtctgttgatctacggaaagaacaatgta attgttagaaatatgacgattagtaaagtacgtacctattctaatattatcattaaagaa ggtgctcatcacgtatgggtagaccattgcgatcttggatcagagctggtcagcgactgg gattattatgatggattattggatgttggaacaggtgctgattatgtgactttatcatgg aataaattacatgacaatcacaaagcaatgctgatcggttttagttatacccgtccagat gatgccaatcacctaaaagtaaccgtacaccataacttgttctctaacatttcagaacgt actcctgatgtgagatacggaaatgttcatgtattcaataactatatgttgaatgcaggg tatgttggatcactaatgggtgcaactgtaagagtagaaaataactatttcaaaggttct tctcttccaatcagaactgaaattagcccggttgcaggtgtaatcagtggtttaagtacc aacatttttgaaagctctggaagcaacaaaattacttcggctccttcaacatgggtacca acttatgagtataaatcagcgctggatgcagcagcaaacgtaccagctattttaactaaa agtgctggtgcaactttataa

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