Pedobacter sp. PACM 27299: AQ505_09975
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Entry
AQ505_09975 CDS
T04140
Name
(GenBank) ligand-gated channel protein
KO
K16092
vitamin B12 transporter
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_09975
Transporters [BR:
pep02000
]
Other transporters
Pores ion channels [TC:
1
]
AQ505_09975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Talin_middle
Motif
Other DBs
NCBI-ProteinID:
ALL05792
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All DBs
Position
2387750..2389831
Genome browser
AA seq
693 aa
AA seq
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MRRNKFAGLGIKACFFTILAFTGLGGVMPLNLQAQTQPVKPESRRDSSGQQDSLEKVNAL
KEVQIKTIKLSRRQTSSTPLQILSGAELEKLNSLSVADAVRYFSGVQLKDYGGIGGLKTI
NVRSMGSNHTAVFYDGVQLGNAQNGQVDLGKFSLDNIEEIELYNGQKSSILQSAKSFASA
SSLYLKARQPNFEAGRSNRLKAAFRTGSFGLVNPSILWQSKLSEHTYSTVSAELKKANGR
YKYRITNGVYDTTAVRTDGDVEAMRLELGLNGILSDSSKWNVKLYGYKDNQGLPGAIVAN
VFHFAQRMWNRNFFAQSAYEKNIGKYSLVASAKYSNDYMRFLNPDIVKTTGFLDNTYHQQ
ELYLSLANKLNINKFWDVVWSADYQLNDMNANLDLFAYPTRYTLLNAVATQFHFDRLDIQ
ANLLSTLLKDKVESGPAAGSKNELTPTVMVSWQPFNQKEFRIRSFYKSIFRMPTFNDLYY
TFYQFTVLRPEYTKQYDLGFTYIKGYEHRALKQFSIQADAYFNQVKDKIVAVPGTSQAMW
SMRNLGKVEIKGMDVNVQSAWELADALNLSLGLTYTYQQAIDADPISTTYKDQIPYTPKH
SGTFLAGASYKKFALNYSYLYTGERYDQSANIPKNYVQPFYTHDLALHYHTQIQKRKLRL
TGEVNNLLNQAYAVITNYPMPGRSYRFSLTYEY
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaacaaatttgccggtttgggcatcaaagcttgtttttttactattctagcc
tttacagggctcggaggagttatgcctttaaatttgcaggcacagactcagccagttaaa
ccagaaagtcgtcgggatagctcaggccaacaggattccctggaaaaagtcaatgctttg
aaagaagtgcagattaagaccataaaacttagcaggcgacaaacgtcttctactccttta
caaattctttctggtgcagagctggaaaagctaaatagcctttccgtagccgatgcagtg
cgttatttctctggggtacagcttaaagactacggtggaattggcggattaaagaccatc
aatgttcgtagtatggggagtaaccatactgcagtgttttacgatggtgtacaattggga
aatgcgcaaaatggacaggtagacctgggtaagttttcattagataacattgaagagata
gaattgtataacggacagaagagcagcattcttcagtctgctaaaagctttgcttcggca
agctctttatacctgaaagccaggcagccaaatttcgaagccggcaggagtaatcgtctt
aaagctgctttcagaacaggctcatttggtttggtaaatccttctatattgtggcagagt
aaattgagcgagcatacttatagcacagttagtgcagaattgaaaaaagcaaacggtcgt
tacaaataccgcattacgaacggtgtttatgatactacagcagttcgtacggatggggat
gtagaagcgatgcgactggaacttggtttaaatggcatcttgtccgacagtagtaaatgg
aatgttaagctatatggttacaaagacaatcagggtttacctggcgccattgtagccaac
gtttttcactttgcacagcgcatgtggaaccgcaatttctttgcgcaatctgcttatgaa
aagaacatcgggaaatacagcctggtcgcttcagccaaatattcaaatgattacatgcgt
ttcctgaatccggatattgtaaaaaccacaggttttctagacaatacctaccatcagcag
gaactctatctctctttagcgaataagctgaatattaataaattctgggatgtggtctgg
tctgctgattaccagttgaatgatatgaatgccaatctggacctctttgcttatcccaca
agatatactttgctgaatgccgtagctacccaatttcatttcgacaggctggatattcag
gcaaatctattgagtaccctgctgaaggataaagtagaatctggtcctgcagcaggaagt
aaaaatgaattgacccctacagtaatggtatcctggcaaccttttaatcaaaaggaattc
agaatccgatctttttacaagagcattttccggatgcctacctttaacgatctttattat
actttttaccagtttacggtactgcgtccggaatataccaaacaatatgacctcggtttt
acttatatcaaaggttatgagcatcgcgcgcttaaacaattttctatccaggctgatgct
tactttaatcaggtgaaagataagattgtggccgttccgggaacctcacaggccatgtgg
agtatgagaaacttaggaaaagtagaaataaaaggaatggatgtcaatgttcagtccgcc
tgggaattggctgatgcccttaatttaagtctggggcttacctatacttatcagcaggcg
attgatgctgatccaatatctacgacttataaagatcagatcccttacacccctaaacat
agcggcacctttttagcaggggcttcctacaagaaatttgccctgaattatagctacctc
tatacaggtgaacgttacgaccagagcgccaatattcctaaaaattacgtacagcccttt
tatacccatgatctggccctgcattaccatacgcaaatccaaaaacggaaattaaggctg
acaggggaggttaataacctcctaaatcaggcttatgcagtcatcacaaattatccgatg
ccaggccgctcttaccgattcagtttaacctatgaatattaa
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