Pedobacter sp. PACM 27299: AQ505_11300
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Entry
AQ505_11300 CDS
T04140
Name
(GenBank) hypothetical protein
Organism
pep
Pedobacter sp. PACM 27299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reg_prop
Response_reg
HATPase_c
Y_Y_Y
HTH_18
HisKA
HTH_AraC
SGL
Beta-prop_LRRK2
CIF
Ig_J
Motif
Other DBs
NCBI-ProteinID:
ALL06027
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Position
2685439..2689473
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AA seq
1344 aa
AA seq
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MFNPFRTLAITVSLLWITLPSAAIDFSSVFYLGIENGLSNNEVNCLFQSRDGFMWFGTFD
GLNRYDGYSFKIFRKKLKDGNSLINNRIQCLAEDEAGNLWIGTMGGVSIYNAAKEKFNTL
YFNALSKKGKQLVDNTTVLKREGKNDMLIGTAKDGLLLYMAATGKTIQIPFVSGSSKRVS
YQVTAIERDKNNQVWLFIEGLGLCKYDRKTQTVSLLSNTLKNVSCIQADTLGNLWLGTSS
GIYNYRIADRTFSFRPLPRPVTSLYFDQSDQLCITTDGGGIFMININEEKMTQPFRLNEK
ELFTSTAIKGMLRDHQGRVWVATLRGGINVIDNQRYRFKTLNPDPLEKNSYHNYFISSFA
EDAANNIWIGTDGNGLDRWDRKRNIYVNYKKEARNGLTSNNITTILNDHQNTIWLATWGG
GIHRFQKSAGTFEHFSCIHPVSGLEFKNVWKLYEDKQHNLWASTFDNGGLYKFNPALKRF
ELFDDAIGNILCFMEDRKGDLWAGTDSKLIRIDRRLKKHLVYHIGHRVRAILEDKGAILW
LGTEGGGLLSLNTSSKKYRRFTESDGLPNNAVLNILPDQEGALWLSTFYGLSKFNPTTKK
FHNFFASDGLQSNQFSYLAAAKLKSGELIFGGIKGFNVFSAEKISFSRDKQQILLTEVSI
DNKPVSESLNAEFVKKTTAGVIDQLLIPYHKASLSFGFISLEYSKPDKINYAYFLEGWDN
NWINAGKVRTANYSRLKEGTYTFHIKASNSEGEWGDEQLVSIVVLPPWQRTWWAYALYAL
VIGLGVYLYVRYKRQQLDLNYKVRLAQMETEKEKELNEKKLSFFTNITHELRTPLTLIVN
PVKELIGKTEDTLKKELTVIYRNASRLLTLVDQLMLFRTTDQETAKVQLSELNFYQLCKD
TFESYQKIALSKHIHYEFECANHDLMIFGDYEKLEIIFFNLLSNAFKFTPSNGSILFKVE
ENETEVSVFINDTGCGINENVKNKLFEKYYQGKNSAKNKEIGFGIGLYLAKQFIDCHQGE
LSYSSEPGTGTSFQIKLKKGMWFDPATPAAVPLENKLLQRPEQIPAEEITEVPNINTLEI
TEKRSLLIVDDNMELRQYLKKIFSPQFVVYEAENGLAGFELAQKLVPDLVISDVLMEEGN
GVELCKKIKTEPMLNHIPVILLSGLSSAESKLKGIESGADDYIIKPFDKDLLLAKINAVL
DNRDTLHQYFRDNITLRNNNQKISATYKAFLEKCIAIVEENLSNEDFNAQWLARSCNLSY
SILYKKVKSISGLSLNAFIRSIRLRKAALLMLSTNTNVNEAAFQVGIYDIKFFRLQFKKL
YGMNPSDYIKKYRNSFSKEFNLIK
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatccttttagaactcttgcgatcactgtttcattattatggatcaccttacct
tcagctgcaattgacttttcttcggtattctatttaggtattgaaaatggcctttctaac
aatgaggtaaattgtctttttcagagcagggatggtttcatgtggtttggtacttttgat
ggattgaaccgttatgatggctacagtttcaagatcttcagaaagaagctgaaagatgga
aattcactgatcaacaacaggatccaatgtcttgcggaagatgaggctggaaatctgtgg
attggcacgatgggcggggtatccatttataatgcggcgaaggagaagtttaatacgctg
tattttaatgcactttcgaaaaaaggaaagcagctggtggacaataccacggtattaaaa
agagaaggaaaaaatgatatgctgatcgggactgctaaggacggcttactgctgtatatg
gcagcaacaggaaagaccatccagattccgttcgtatccggttcttcaaaacgtgtttcg
tatcaggtaacggccatagaaagggataaaaataaccaggtttggttgtttattgaaggc
ctgggtttgtgtaaatacgatagaaaaacacaaacggttagtctcttgagtaatacctta
aaaaatgtctcctgtattcaggcagatactttgggcaacctgtggctgggtacaagttcg
gggatctataactataggattgctgaccgaacattctctttcaggccattgccccgacca
gtaaccagtttgtatttcgatcagtctgatcagctttgcatcaccacagatggcgggggg
attttcatgatcaacatcaatgaagaaaagatgacccagccttttaggctgaatgaaaag
gaactttttaccagcacggcgataaaaggaatgttaagagaccatcagggcagggtctgg
gtggccacattaagagggggaatcaatgtcatagacaatcagcgataccgatttaaaacc
cttaatcctgatcctttagaaaagaacagttaccataactattttatttcttcattcgct
gaggatgctgccaataacatttggatagggacggatgggaatggactggaccgctgggac
cgcaaaaggaatatatatgtaaactataaaaaggaagccaggaatggcttgacaagcaac
aacatcacgaccattttaaatgaccatcaaaataccatttggctggctacctggggcggg
ggaatccatcgtttccagaagtcagcagggacttttgagcattttagctgtatccatcct
gtcagtggtttagagtttaaaaatgtatggaaattatacgaggacaaacaacacaattta
tgggcaagtacgttcgacaatggcggattgtacaagttcaatccagcgctgaaacgtttt
gagttatttgatgatgcgattggcaatatcctttgctttatggaggatcgtaaaggcgat
ttatgggcgggaacggatagtaagttaatccgcatcgacaggcgcttgaaaaaacacctg
gtttatcatattggacatcgggtaagggctattctggaggataaaggagctattttatgg
cttggaacggagggcggtggattgctttcactaaataccagcagcaagaagtacaggcga
tttacagaaagcgatggattgccgaataatgcggtattgaatatcttgcctgatcaggag
ggcgcgctttggctgagtactttttatgggctttcgaaattcaatccgaccactaaaaag
tttcataatttctttgcctctgatggcttgcaaagcaatcagttcagttacctggcagcg
gccaaattgaaatccggagaattgatattcggagggatcaaaggttttaatgtgttctca
gcagagaaaatcagcttctccagggataaacagcagatcttgctgacggaggtaagtata
gataataagcctgtaagcgagagtttaaatgcggagtttgttaagaaaacaacggccgga
gtcatcgatcagctcctgatcccttaccataaggcatcgctgtcttttggctttattagt
ctggagtattctaaacctgataagattaattatgcctattttttggaaggatgggataac
aactggatcaatgcaggaaaagtaaggaccgcaaattacagcaggttaaaagaaggaaca
tatacgtttcatatcaaagcaagcaatagcgaaggggaatggggggatgaacaattagtc
agcattgtggtgctgccaccctggcagcgaacctggtgggcttatgctttgtatgctttg
gtgattgggctgggcgtttatttgtatgtcaggtataagcgtcagcagctcgacctgaac
tataaagtgcgtctggcacaaatggaaactgaaaaagaaaaagaactcaatgagaagaag
ctttccttttttacaaacatcacccatgaattgagaactccgctcactttaattgtgaac
ccggttaaggaactgataggtaaaacagaagatacgttaaaaaaggaattgacggtgatc
tatagaaatgcgagccgtttattgactttagtggaccagctgatgctgttcaggacaacg
gatcaggaaacggctaaggttcagctcagtgaattgaatttttaccagctgtgtaaagat
acttttgaaagctatcagaaaattgctttgagcaagcatattcattatgagtttgaatgt
gcaaatcatgacctgatgatttttggggactatgagaagctggaaattatcttttttaac
ctcctttccaatgcttttaaatttacgccttccaatggcagtatcttgtttaaggtggaa
gaaaatgaaactgaggttagcgtttttatcaacgacaccggatgtgggatcaatgaaaat
gtgaagaataaactctttgaaaagtattaccagggaaaaaatagcgcaaagaataaggag
atcggatttggcattggtttgtatctggcaaagcaatttattgattgtcatcagggagaa
ttgagctattccagcgagccgggtacagggacttcatttcaaatcaaactgaaaaaagga
atgtggtttgatcccgctaccccggcagcagtgccactggaaaataagctgctgcagcgc
ccagagcagattccagccgaagaaattactgaggttcccaatatcaatacactggagatc
actgaaaaaagatcattactgattgtcgatgataacatggaactgcggcagtacctgaaa
aagatctttagtccgcagtttgtagtatatgaagcggagaacggtctggcaggctttgaa
ctggcacaaaaactggtgcctgatctggtgatcagtgatgtgctgatggaagaaggaaat
ggggtggagctctgtaaaaagataaaaactgagcctatgctgaaccatattcctgtgatt
cttttatctggcctcagctctgcggaaagtaaattgaaggggattgaaagtggggcagat
gattacatcattaagccgtttgacaaggacttgctgctggctaaaatcaatgcggtatta
gacaacagggataccttgcaccaatattttagagacaacattaccctccggaataacaat
cagaaaatatctgcgacctataaagcttttctggagaaatgtattgccattgtggaggag
aatttaagcaatgaagatttcaatgcgcaatggctggccaggtcttgtaatttgagttat
tctatcctctacaaaaaagtgaaatccatttccggcctttctttaaatgcatttatacgg
tctattcggttgcgtaaggcggcattgttgatgctgagcaccaataccaatgtgaacgaa
gccgcatttcaggtggggatttatgacatcaagtttttcaggctgcaattcaagaaattg
tatgggatgaatccttctgattatattaagaaataccgaaattcctttagtaaagaattt
aacctgatcaaataa
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