Pedobacter sp. PACM 27299: AQ505_11780
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Entry
AQ505_11780 CDS
T04140
Name
(GenBank) starch-binding protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_11780
Transporters [BR:
pep02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AQ505_11780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
Motif
Other DBs
NCBI-ProteinID:
ALL06111
UniProt:
A0A0P0NG27
LinkDB
All DBs
Position
2805507..2807132
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AA seq
541 aa
AA seq
DB search
MKSYIHKALGLLSLTVGISTLNSCTKLEENLYSELYKDNFYKNKTEVLQSALRPMTHLQS
WIAPIRGDGYYYHAEMSADQLAWPQKGRHAYDNGDHIRQHYHSWTLNENRLNNAWVGMWT
GVGYVNAAIEDLEKLDATKVGMTDAELKMILAELHVLRGFHYLKLVDTWGNIPIATKVGE
PKNPATASRKEVFDFIKTELETYVPQLAPYSEALIGRIGQTGGYAMLAELYLNAEKWTGT
PMWDQCIAVCDKIMAGTAGGLGGAPKLAANLTSTFSNTNRTATEALFQLAYSRKGGFEWQ
WIVLHGFSYMNDALNVSYEGNNAYVVTPPAFNAYAANDLRKKEWFLFGPQYKYGTTTPIL
GSEEYSGKPFILVNSIRRESEGDLTSDGGMTKGEENSGARFNKYKSGILSDVNYKENQFM
VYRLTEIYFDKAEAIMRKNGNTATQEAVDLINASRKRAFTDQDWEAAKYTTATLTMDELL
AEKGREFIFEGKRRTDIIRFGRFTKGTWWDHTPTNDARREIYPIPFRQMANNVNLVQNPG
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatatatacataaggccttaggcctgttaagtttaacagttgggataagtaca
ctaaactcctgtactaaactagaggaaaatttgtacagtgagctgtataaagataatttc
tacaaaaataaaactgaagtgcttcaaagtgcattacgtccgatgacacatttgcaatcc
tggattgcaccaatacgcggtgatggctattattaccatgcagagatgtctgcagatcag
ttggcatggcctcaaaaaggtcgtcacgcttatgacaatggagatcatattcgtcagcat
tatcactcctggacactcaatgaaaaccgcttaaataatgcctgggtagggatgtggaca
ggtgttggctatgttaatgctgccattgaagatttggaaaaattagacgccactaaagtt
ggaatgactgatgctgagctaaaaatgattcttgcagaactgcacgttttaaggggtttt
cattacctgaaattagtagatacctggggtaacattccaattgcgactaaagttggggaa
cctaagaatcctgctacggcttctcgtaaagaggttttcgactttattaaaacagaactg
gaaacttatgttcctcagctggcgccttattcggaagcattaattggtcgtatcggacaa
actggcggttatgccatgcttgctgaactatacctgaatgcagagaagtggactggtacg
ccgatgtgggatcagtgtattgcagtctgtgataaaatcatggctggaactgcaggtgga
cttggcggtgcacctaaattggctgctaatttaacttcaactttctccaataccaataga
accgcaacagaagctttgtttcaacttgcttatagtcgcaagggaggttttgaatggcaa
tggattgtactgcatggtttttcttatatgaacgatgcgctgaacgtttcctatgaaggg
aacaatgcttacgtggttacaccacctgcttttaatgcttatgctgcaaatgacttgcgt
aaaaaagaatggtttttgttcggtcctcagtataaatatggaaccactactccgattctg
ggatctgaagaatatagcggaaaaccatttattctggtcaactctattagaagggaaagt
gaaggcgatttaaccagtgatgggggaatgacaaaaggagaggagaatagcggggcaaga
tttaataaatataaatctggtatactcagcgatgtaaattataaagaaaatcaatttatg
gtgtatcgcctgacggagatttattttgataaagctgaggcgatcatgcgtaaaaatggt
aacaccgctactcaagaagcggtcgatttgatcaacgccagtcgtaagcgtgcttttacc
gatcaggattgggaggcggcaaaatataccacggccacgctaactatggatgaactgctt
gctgaaaagggcagagagtttatatttgaaggtaaacgtcgtacggatatcatccgtttt
ggacgctttacaaaaggtacatggtgggaccacacgccaacaaatgatgccagaagagag
atttatccaattcctttccgtcaaatggcgaataatgtaaacctggttcaaaatccagga
tattaa
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