Pedobacter sp. PACM 27299: AQ505_12055
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Entry
AQ505_12055 CDS
T04140
Name
(GenBank) hypothetical protein
KO
K02014
iron complex outermembrane recepter protein
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_12055
Transporters [BR:
pep02000
]
Other transporters
Pores ion channels [TC:
1
]
AQ505_12055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
EMC7_beta-sandw
SdrD_B
SpaA
NOMO_3rd
HutF_N
Motif
Other DBs
NCBI-ProteinID:
ALL06159
LinkDB
All DBs
Position
complement(2874621..2877134)
Genome browser
AA seq
837 aa
AA seq
DB search
MKYIYLISFLCFLSSLSFTHQAKAQERGHIKGLIQDEQGIPAANVNIRISSGPIVSIEPG
VPSVPNSAVISNISSPRKSDQNGAFAFQNLPYGEYQLIFTRVGFQPYTLSVSINEAQKEI
EMKVTLKSSDDQLQEVVVMGRKKQSYVNTKSFIGSKIESKITEIPQTISVVTKELMEDKQ
AFIITDVVADLPGVTQFSAYDDLTIRGFRNGNESGFRLVNGLRSGYGYGTSYFRVPLTLN
LESVEILKGPGAALFGDISPGGTVNMNTKKPLEDRRHSIAVAAGSFNTIRTMMDFTGPLD
EEKKILYRLNLGHETTNTFRDINARKSFMIAPTFTFRPTENTTINAEINYSNFDGYLDRG
MGIRGGDFYALKRSFTLSQPSDYFKVNDISLNASLNHRINDKLSFNANYMKFIYAENLSE
HRTLNTFADAPLNTIMNMRYIQKQTKEFTDNVSAYLHYKGGVKDFKFDVVAGLDYVGYET
DKGGHQWEARSQTIDGKVVPLRFDLSNPTYELRNPALYNRLPLAQFFVDYLNSSYQTTGV
FIQNRIRWREKLNILFGLRYENYGDQRKFEGASYEKVKQSVFLPRIGLNYAINQQFNYFV
SYSQGFIPINPQFVRNPENYGRTEPFKSQTSYQVETGLKTEFFNQRLFSSVSFYHIERQN
MLVNTGQIADNGNPIYRQNGRVKSQGLEFDLKGNLFPFLNISANYAFNLAEVMESDLKLE
KGMVNANAPKHLAALWAKYTQRDGALQGLGIGIGGQYVGKKRMENTVQHIQSGELEWKFW
PSYFIANAAVYYKLDKMTFSINANNLFDKYYFVGGFDYTRAFPGSPRNLMTAIKYTF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatttatttaatttcctttctttgctttttgagcagcctatcttttacccat
caggcaaaggctcaggaaagaggccatattaaaggcctgatccaggatgagcagggcatc
cctgctgccaacgtcaacattcgcatttccagtgggccaattgtttccattgagcctggt
gtgcccagcgttccaaatagtgcagtcatctccaacatttccagcccaaggaaaagtgac
caaaatggggcattcgccttccagaacctcccttatggtgagtatcagctgatctttacc
agagtcggatttcaaccctataccctctcggtttccatcaatgaagcacaaaaagaaatt
gagatgaaagtaactttgaaaagttctgacgatcaattacaagaagttgtagtcatgggc
agaaagaaacaatcttacgtcaatacgaaaagctttatcggctcaaaaatagaatctaaa
attaccgaaatcccacaaaccatttctgtggtgactaaggagctgatggaagataaacag
gcttttataattaccgatgtggtagctgacttaccgggtgtcacgcagttctctgcttat
gacgatttaaccatccggggatttagaaatggcaatgaaagtggcttccgactggtcaac
ggcctccgttccggatatggctatgggaccagttatttcagggttcctttaacgctcaac
ctggaaagtgtagaaatcctgaaaggccctggtgcggcattatttggggacatcagtccg
gggggaaccgtaaatatgaacaccaaaaagccgctggaagaccgcagacacagcatcgca
gttgccgcaggatcttttaacaccatccgtaccatgatggattttaccggtccgctggac
gaggaaaagaaaatcctttaccggttaaacctcggacatgaaaccaccaatactttccgg
gacatcaatgcccgtaagtcctttatgatcgcacctactttcaccttcaggccgaccgaa
aacaccaccatcaatgcggaaattaattacagcaattttgatggttacctggacagagga
atgggcatcagaggtggagatttttacgcattgaagcgcagctttaccttgagccagccg
agtgattattttaaggtgaatgacatttccctgaatgcttccctaaatcaccgcattaac
gataaactctctttcaatgccaattatatgaaattcatttatgcggaaaacctgtcggaa
caccgtaccctgaatacctttgcggatgcgcctttgaatacgatcatgaacatgcgttac
attcaaaagcagaccaaagaatttacagacaatgtttccgcatacctgcattacaaaggc
ggtgtaaaagatttcaaatttgatgtggttgctggtttggattatgtaggttatgaaacc
gacaaaggtggtcaccaatgggaagccagaagccaaacgatagatggaaaagtggtgcct
ttaagatttgacctcagcaaccccacttatgaattgagaaatccggcattatacaaccga
ctgccattggcacagttctttgtcgactacctgaattcttcttaccaaaccaccggagtt
tttatacaaaacagaatccgctggagagaaaaactgaacatcttattcgggttgaggtat
gaaaattatggcgaccagcgtaaatttgaaggggccagttatgaaaaagtaaagcaatcc
gttttcttacccaggattggattgaactatgccatcaaccagcagttcaattatttcgtc
agctacagccagggcttcatccccataaaccctcaattcgtccgcaatccagagaattat
gggcgtacggaacctttcaaaagtcagacgagctatcaggtagaaactggtctgaaaacc
gagttttttaaccagcgcctcttttcgtctgtatcgttctaccatattgagcgtcagaac
atgctcgtgaacaccggacaaattgccgataatggcaacccgatctacagacaaaatggt
agggtaaaatctcagggtctggagtttgacctgaaaggcaacctgttcccattcttaaac
atcagcgccaactacgctttcaacctggcagaagtgatggaaagtgaccttaaattggaa
aaaggaatggtgaatgccaatgcgccgaaacacctggccgcgctttgggcaaaatacacc
caacgcgatggtgccctgcaaggcttaggaattggtattggcggacaatacgtaggcaaa
aagagaatggaaaatacggtgcagcacatccagtctggagaattggaatggaaattctgg
ccttcctattttatagcaaatgccgccgtatattacaaattggacaaaatgactttctct
atcaatgccaacaacctgttcgacaaatactattttgtgggtggatttgactataccaga
gcctttcccggaagtccgagaaacttgatgaccgccataaaatatacattctaa
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