Pedobacter sp. PACM 27299: AQ505_13630
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Entry
AQ505_13630 CDS
T04140
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pep03000
]
AQ505_13630
Transcription factors [BR:
pep03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AQ505_13630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
MarR
HTH_10
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ALL06446
UniProt:
A0A0P0NHY4
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All DBs
Position
3229664..3230689
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AA seq
341 aa
AA seq
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MKRQKRTTIYDIAEKLNLAASSVSRALSNSDKINAETKALVLKTAAEMNYQQNAMASNLR
KGSNPTIGVVVPRINQYFFSNIIAGLEEVTFNKGYNLVICQSNESHEREVEVVNTLINQN
VSGIVISIAAETGSSDHLQQVVDRNIQLIQFDRVVEDLETFKVLNDNHKASYDAVIHLIE
QGYRRIALLEGPQELHIFRERKEGYIAALKASGFPILEELMYANAWTKELGAQATAELLE
MASPPDAIFASTSDFAALGVLEAATGKGIRIPEELGICGYSNEPFTEITSPSITTIDQFS
IEMGKTIGNLHFQELVNSGMVIKKTVNIMPKLIVRKSSQRV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccaaaaaagaacaactatatacgatattgctgaaaagctcaatttagcggcc
tcttccgtgtccagagcactgagcaatagtgataaaattaatgcggagacgaaagcattg
gtacttaaaaccgctgctgaaatgaactatcagcaaaatgcgatggcctctaacctgcga
aaaggcagtaatccgacgataggcgtagtcgttcctcgaatcaaccagtatttcttttcc
aacattattgctggtttggaagaagtgacttttaacaagggctacaacctcgtgatttgc
cagtctaatgagtcccatgagcgcgaagtagaggtggtgaacaccctgatcaatcagaat
gtgagtggaattgtgatctcaattgccgcagaaacaggcagttcagatcatctgcagcag
gttgtagaccgtaacattcagctgattcagtttgaccgtgtggtggaagacctggaaaca
tttaaagtgctgaacgacaatcataaggcttcttacgatgccgtaatccacctgattgag
caaggctaccgcaggattgccttattggaaggtccccaggagctccatattttcagggaa
agaaaggaagggtatatcgcagccttgaaagcaagtggcttcccgatactggaagaactg
atgtatgccaatgcctggacgaaagagcttggtgctcaggctactgctgaattgctggaa
atggccagtccaccagatgcgatattcgcctctacatccgattttgcggctttaggggtg
ttagaagccgctacaggaaagggaatccgtattcctgaagagctgggcatctgtggatat
tccaatgagccttttacagagattaccagtccatccatcaccactattgatcagtttagc
atagaaatgggaaaaactataggaaatcttcattttcaggagctggtaaattcaggaatg
gtgatcaaaaagacggtcaatatcatgccaaagctgattgttagaaagtctagtcagcgg
gtttaa
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