Pedobacter sp. PACM 27299: AQ505_13745
Help
Entry
AQ505_13745 CDS
T04140
Name
(GenBank) tRNA-specific 2-thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AQ505_13745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pep03016
]
AQ505_13745
Enzymes [BR:
pep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
AQ505_13745
Transfer RNA biogenesis [BR:
pep03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
AQ505_13745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
ThiI
QueC
Arginosuc_synth
DUF7411
ATP_bind_3
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
ALL06465
LinkDB
All DBs
Position
complement(3263605..3264696)
Genome browser
AA seq
363 aa
AA seq
DB search
MSKLGRILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYATSGTSSKETGCCSLDSIN
DARTLAVNYGFPHYILDIRDEFGDYVIDNFVDEYLAGRTPNPCVLCNTHIKWEALLKRAN
KLDCEFIATGHYANVREHDNGRHVISKGLDENKDQSYVLWGVSQENLARTKFPLGSFAKA
DIRQMALDMGQEELAKKSESYEICFVPDNDYRAFLRHKVGDLEDRVAGGNFITSDGMVVG
QHKGYPFYTIGQRKGLGIAFGEPMFVTQILPESNTVMLGRADELERHEAMVRNVNLIKYE
NILAPMTDVVTKIRYKDAGTLSTIVQENDKMKVVFDHAVSAIAPGQSAVFYEGNDLLGGG
FLC
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaactcggtagaatattggtagccatgagtggcggagtagatagttcagtggca
gcagtgatgctgcacgaacaaggatatgaagtaatcggattaaccatgaagacatgggat
tatgcgacctcaggtaccagcagtaaggaaaccggatgttgcagtctggacagcatcaat
gatgctcgtacattggcggttaattacggatttccacactatatattggacatcagggat
gagttcggtgattatgtaattgataacttcgttgatgaatatcttgcaggccgtacccct
aacccttgtgttttatgtaacacccatatcaaatgggaagcgctattgaaacgtgcaaac
aaactggattgtgaatttattgcaactggtcactatgctaacgttagagagcacgacaat
ggtcgtcatgtgatctctaaaggtctggatgaaaataaagatcaatcttatgtactttgg
ggtgtttctcaggaaaaccttgcacgtactaaattcccattaggatcgttcgcaaaggcg
gatatcagacaaatggctttagatatggggcaggaagaactggctaagaaaagcgaaagc
tatgaaatctgctttgtaccggataatgattaccgtgctttcttaagacataaagtaggt
gatttagaagaccgcgtagctggtggaaatttcattaccagtgatggtatggtggttgga
cagcataaaggttatcctttttacacgatcggacagcgtaaaggtttaggaattgctttt
ggtgaaccgatgtttgtgacgcaaatccttccggaaagtaatacggtaatgttaggcaga
gccgatgagctggaacgtcatgaagccatggttagaaatgtgaacctgattaagtatgaa
aacattttagcacccatgactgatgtggtgactaaaatcagatataaggatgcaggaacc
ctaagtactattgtacaggagaatgataaaatgaaagtagtatttgatcatgctgtatct
gcaatagcaccgggtcagtccgcagtgttctatgaaggaaacgaccttcttggtggcggt
ttcctttgctaa
DBGET
integrated database retrieval system
