Pedobacter sp. PACM 27299: AQ505_14035
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Entry
AQ505_14035 CDS
T04140
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pep03032
]
AQ505_14035
03400 DNA repair and recombination proteins [BR:
pep03400
]
AQ505_14035
Enzymes [BR:
pep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AQ505_14035
DNA replication proteins [BR:
pep03032
]
Prokaryotic type
DNA Topoisomerases
AQ505_14035
DNA repair and recombination proteins [BR:
pep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AQ505_14035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ALL06518
LinkDB
All DBs
Position
complement(3331081..3333705)
Genome browser
AA seq
874 aa
AA seq
DB search
MAEDLENQENDKIIKINIDEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMLDL
GLANNKPYKKSARIVGEVLGKYHPHGDASVYNTMVRMAQEWSLRYLMVEGQGNFGSIDGD
SPAAMRYTEARFQKIAEDMLADINKDTVDFQLNFDDSLQEPTVLPAKVPNLLINGSSGIA
VGMATNMPPHNITEVINGTIAYIENKEITIAELMKHIKAPDFPTGAIIYGYTGVQEAFET
GRGRIVMRAKAEIETHKDRETIIVTEIPYQVNKAMMIERTAELVGEKKIEGISNIKDESN
KDGIRIVYEIKRDANASIVLNNLFKQTALQTSFSVNNIALVNGRPQMLNVKDLIRHFVDH
RHDVVVRRTKFELAEAKKRAHILEGLLIALDHIEEVIKLIRASNTPEEARVGLMEKFGLS
DIQARAILDMTLRRLTGLERDKIKEEFEELMKTIEYLQSILDSEDLRMIIIKDELTEMME
KYGDERRTQIVHSAEDMSMEDFIEDEDVVITISHEGYIKRTPATEYRTQGRGGKGSKGSD
SRNEDFIEHLLVASNHNYMLFFTESGRCFWLRVYEIPEGSRLSKGRAIQNIINIPKEEKI
KAYIKVKNLKDQEYLENNYIIMCTKKGTIKKTSLEAYSRPRVNGINAININEGDQLLEAS
LTTGKSEIVMALRSGRAIRFNEEKVRPMGRTATGVRGVTLAHDQDEVVGMIAVDDPGVTI
LVVSEKGYGKRTDIEDYRVTNRGGKGVKTISVTEKTGALVAIKNVTDADDLMIINKSGIV
IRIVVSQLRVMGRATQGVRLINLKGNDEIASVAKIEHEDEEVELEEGEEGAVVVNDAIVT
DEIAGSQSEEIIEEEEETEEDDEEDEEDTEEEEN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatttagaaaatcaagaaaacgacaaaataataaaaatcaatattgacgag
cagatgaaatccgcttacatcgattattcgatgtcggttattgtatcaagggctttacct
gatgttcgtgatggattaaaaccagttcaccgccgtgttttatacggaatgctggatctg
ggacttgcaaacaacaaaccttataaaaaatctgcccgtatcgtaggggaggttttaggt
aagtatcacccacatggtgatgcctcagtttataatacgatggtaaggatggctcaggaa
tggagcttgagatacctgatggtagaaggacaaggtaactttggatctattgatggtgac
tctcctgcagcgatgcgttatacagaggcccgtttccaaaagatcgcagaagacatgctt
gccgatatcaataaagataccgtagatttccagcttaactttgatgattccctgcaagag
ccaacggttcttccagctaaagttccaaacttactgatcaatggttcttccggtattgcg
gtgggtatggcgacaaatatgccaccacacaacattacggaggtgatcaacggtacgatt
gcctatatcgaaaacaaagaaatcaccatagctgaattaatgaagcacataaaggcacct
gattttcctacaggagcaattatttatggctatacaggtgttcaggaagctttcgaaacc
ggtagaggccgtattgtcatgcgtgccaaagcagagattgaaacgcataaagatcgtgaa
acgattatcgttacagaaattccttatcaggtaaataaagcgatgatgattgagcgtacc
gctgaactggtaggtgagaaaaaaatcgaaggtatttccaatattaaagatgaatctaac
aaggatggtatccgtatcgtttatgaaattaaacgtgatgcgaatgcttcaattgtttta
aataacctattcaaacagactgctttacaaacttcattcagtgtcaacaatattgcgctt
gttaatggcagaccgcaaatgctgaacgtgaaagatttgattcgtcatttcgttgaccac
agacatgatgtagtggtgagaagaacgaaatttgaactggcagaagctaagaaaagagcg
catattctggaagggttattaattgctttggatcatattgaagaagtaattaaattaatt
cgtgcttcgaatacgcctgaggaagctagagtaggattaatggagaaatttggtttgagt
gatattcaagccagagcaattcttgacatgaccttacgtaggttaacaggtctggaacgc
gataaaatcaaagaagaattcgaagaattaatgaaaactattgagtacttacaatctatt
ctggattcagaagatttacgtatgataatcattaaggatgagttgactgaaatgatggag
aaatatggtgatgagcgtagaactcagatcgtacattctgcagaagacatgagcatggaa
gatttcatcgaagatgaagacgtagtgatcacgatttcacatgaaggttatatcaagcgt
acacctgcaactgaataccgcactcaaggtagaggtggtaaaggatctaaaggtagtgat
tcaagaaatgaagatttcattgagcacctattagtagcttcaaaccacaattacatgttg
ttctttacagaatcaggacgttgtttctggttgagagtttatgaaattcctgaaggatcg
agactaagtaaaggtagagcaattcagaacatcatcaatattcctaaagaggaaaaaatt
aaagcatacattaaggtaaagaatttgaaggaccaggaatacctggaaaacaattacatt
atcatgtgtactaaaaagggaacgatcaaaaagacctctttagaagcttattcaagacca
cgtgtaaatggtatcaatgcgattaacattaacgaaggtgatcaactattagaagcaagc
ttaaccactggaaagagcgaaattgtcatggctttacgttctggaagagcaattcgtttc
aatgaggagaaggtgagaccaatgggtagaactgcaaccggagtaagaggtgtaacgctt
gcacacgaccaggatgaggtagttggcatgattgctgttgatgatccgggtgtaactatt
ttggtagtttcagaaaaaggttacggtaaacgtactgatattgaagattaccgcgttaca
aatagaggtggtaaaggtgttaaaaccattagtgtaacggaaaaaaccggtgcattggta
gccattaaaaacgtaactgatgcggatgatttaatgatcattaacaaatcaggtatcgtg
atccgaattgtagttagtcaattaagggtaatgggaagagcaactcaaggggtgcgctta
atcaacctgaaaggaaatgacgaaattgcatctgttgctaaaatcgaacatgaagacgaa
gaagttgaattggaagagggagaagaaggtgcagttgtggtaaatgatgcgatcgttact
gacgaaattgcaggatcacaatcagaagaaatcatcgaagaggaagaagaaacagaagag
gatgatgaagaggatgaagaggatacagaagaagaagaaaattaa
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