Pedobacter sp. PACM 27299: AQ505_14740
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Entry
AQ505_14740 CDS
T04140
Name
(GenBank) DNA helicase
Organism
pep
Pedobacter sp. PACM 27299
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
COMPASS-Shg1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ALL06642
UniProt:
A0A0N7JF29
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Position
complement(3493325..3496687)
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AA seq
1120 aa
AA seq
DB search
MEVRKEYILADFDFSELTDLYILKHVNDRVDTGVKGFYDLVPQHIDIDVVFFTDPGSSIP
FPGVGISQRDRKTVITCGCSAVNPKLCRHQAQALHNILNRPSLRLFFDYKLRQERMLLQA
KDYGLETETNLTDFFELEYQQGQTQIKAKMRELYPLTGQSKQDLKKKLLPKEGLQLPVSG
GLKARHKMGLVFGQHRFYSHLTLEIIEAQTTLEGKFKNPIQTICPSDLLWKAEDNAAIKF
FSGVLKFQNNYNADRADSDLDALRAVAKNPLKMEVFLHDTKVSINMTANAIIPIKLNTLN
VDMALHVSQRHEFYEVYGKLTLNGTVFSLDHIQLKYNYFIQIDQCLHLIDNPNYLRVIDF
FKQHHDRILIHHTKFEAFQEEILAKLENKIKVTYDYLKPATKKQIEEKGFDLENEQLIYL
SESEDFVLLTPVMRYGSLEIPVLSRKQIQSRDKNGNLFTLKRDTETELQFISNIMRQHPY
FEDQMESNDCFYLHKTRLLEDQWFLHAFEEWRNKNINILGFNKLKDNNLNPYKANISIHV
MSGIDWFKTAVKLKYGNQVVSLRHLHKSIRNKSKFVKLDDGTMGILPDEWIEKFSKYFNA
GEVVEEHIQTPRISFTAIEELYEAQVLDESVKDQLAMYKSQLSGSGSTITSIKVPEGLNA
TLRPYQKEGLNWLSFLDEFNFGACLADDMGLGKTIQIIAFILAQREKEHHNTNLIVVPAS
LIFNWQQEIQKFAPSIKVMTIYGADRIKSHKDFDQYEVILTSYGTLLTDIRFLKDYRFNY
VFLDESQTIKNPESQRYKTVRLLQSRNRVVLTGTPIENNTFDLYGQLSFACPGLLGSKQH
FREIYSTPIDQFKDKRAATQLQQRISPFLLRRTKEQVAKELPDKTEMVIYCEMEADQRKV
YDGYEKEIRDYLTNQTDEEVASNTMNVLKGITKLRQICNSPALLSEDEFYGSSSAKMEVL
LEQIENKSSAHKILVFSQFVGMLDLIRKELKDRGIGFAYLSGQTKNREAVVDSFQNDPEI
RVFLISLKAGGVGLNLTQADYVYLVDPWWNPAVENQAIDRTYRIGQQKNVIAVRLICPDT
IEEKIMKLQSSKKDLVKDLIKTDHSIYKSLSKTDLLGLFS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggaggttagaaaagaatacatattagcagattttgatttctcagaattaacagattta
tatatactaaaacacgtcaatgatcgggtggatacgggagtaaaggggttttatgaccta
gttccgcagcacatagacattgacgttgttttttttacagatcctggaagcagtattcca
tttccgggtgtgggaatcagtcaaagagaccgtaaaacagtcattacctgcggatgttca
gctgtaaatcctaaattatgccgtcaccaggctcaagccctgcacaatattttgaacagg
ccttctttacgtcttttcttcgattataaattgcggcaggagaggatgctgctgcaagcg
aaagattatggattagaaactgaaaccaatctgactgacttttttgaactggaataccag
caagggcagacacaaattaaagctaaaatgagggagttatatcccttaactggccagagt
aaacaagacctaaaaaaaaaactacttccaaaagaaggattacaattaccggtgtctggg
ggcttaaaagccagacataaaatggggctcgtattcggccagcatcgtttctacagtcat
ctaacgttagagattattgaggcacaaaccacacttgagggcaagtttaagaacccaata
caaaccatctgtccttctgatttgctttggaaagcagaagacaatgctgcgataaagttc
tttagcggtgtactaaaatttcagaacaattacaatgcagatcgtgctgattcagatttg
gatgcacttagggctgtggcaaagaatcccctgaaaatggaggtctttttacacgatacc
aaagtgtcgattaatatgactgctaatgcgatcattccaataaaattaaacacgctaaat
gtagatatggcacttcatgtgagtcagaggcatgaattttatgaagtctatgggaaactc
acactcaatggaacggttttttcattggatcatattcagctgaaatacaattattttata
caaatagaccaatgcttgcatttgattgataaccctaactacttgagggtgattgatttc
tttaagcaacaccatgataggatattgatccaccatactaaattcgaagcttttcaggag
gagattcttgctaagttagaaaataaaatcaaggtgacttatgattaccttaaacctgct
acaaaaaaacaaattgaagaaaaaggttttgacctagagaatgagcagcttatctacctt
tccgaatctgaagactttgtactgctgactccggttatgcgttatggaagcctggaaata
ccagtactatcgaggaagcaaatccagtcgagggataaaaatggtaatttatttacgttg
aaaagagatacggagacggaacttcagtttatttctaatatcatgaggcagcatccttat
tttgaggatcagatggagagtaacgattgcttttatctgcataaaaccaggctgctggag
gatcagtggtttcttcatgcttttgaagaatggcggaataaaaacatcaatatcctggga
tttaataaattgaaagacaacaatctcaatccctataaagccaatatttctatccatgtg
atgagcggaatagactggtttaaaaccgcggtgaagttgaaatatggcaatcaggtggtt
tctttaagacatttacacaaatctatccgcaacaaaagcaagtttgtaaagctggatgat
gggacgatgggaattcttcctgacgaatggattgagaaattcagcaagtattttaatgct
ggtgaagtggtagaagagcacatacaaacaccaagaataagctttacagctatagaagag
ctttatgaagctcaggtactggacgaatcggtgaaagatcagctggccatgtataaaagc
cagctttctggttctggaagtacgatcacctctattaaggttccggaaggattaaacgcg
acgcttagaccataccaaaaagaagggttgaactggctaagtttcctagatgaatttaac
tttggcgcttgtctggcagatgatatgggccttggaaagactattcagatcattgctttt
attcttgcacaaagagaaaaggaacatcacaatactaatttgattgtggtgccggcttcc
ttgatcttcaattggcaacaagaaattcaaaagtttgcaccatctatcaaagtaatgaca
atctatggcgcagataggattaaaagccataaagattttgatcagtatgaagtgatcctt
acctcctatggtactttgctcacggacatccggtttttaaaagactatagatttaattac
gtctttttagatgagtcgcaaactattaagaatccagaatcccagcgatataaaacggtt
cgtttattgcaatccagaaatagggtagtattgacaggtacgcctattgaaaacaacact
tttgacctttatgggcaattgtcgtttgcttgtcctggcttactgggtagtaagcagcat
tttagagagatttattctacgccgatcgatcagtttaaagacaaaagagcggccacacaa
ctgcagcaacgcattagtcctttcttgttgagaagaaccaaagaacaagtagcaaaagaa
ttaccagataagacagaaatggtgatttattgtgagatggaggctgatcagcgcaaagta
tacgatggttatgagaaggaaattcgggattacctgaccaatcaaacagacgaagaagta
gctagtaacacgatgaacgtcttaaaaggcattactaagttaaggcagatttgtaattca
ccagcgctattgagcgaggatgagttttacggcagttcttccgctaaaatggaggtgttg
ctggagcagattgaaaataaatcttcagcacataaaattcttgttttctcgcaatttgtg
ggcatgttggacttgattagaaaagagttgaaagaccgcgggattggttttgcttacttg
agcgggcagacaaaaaaccgggaagcagtggtcgattcttttcagaatgatccggaaata
agggtgtttctaatcagcttaaaagcaggaggagttgggttaaatcttacccaggcagat
tatgtctatttggtagatccatggtggaatcccgcagttgaaaatcaagccatcgaccgt
acttatcgtatcgggcagcaaaagaatgtaattgctgtacgtttgatttgtcctgatact
attgaagagaaaataatgaaactgcagtcctcgaaaaaagacctggtcaaagacctcatc
aaaacagatcattctatctataaatcattatctaaaacggacttgttggggctgttcagt
taa
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