Pedobacter sp. PACM 27299: AQ505_15915
Help
Entry
AQ505_15915 CDS
T04140
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep00260
Glycine, serine and threonine metabolism
pep00460
Cyanoamino acid metabolism
pep00630
Glyoxylate and dicarboxylate metabolism
pep00670
One carbon pool by folate
pep00680
Methane metabolism
pep01100
Metabolic pathways
pep01110
Biosynthesis of secondary metabolites
pep01120
Microbial metabolism in diverse environments
pep01200
Carbon metabolism
pep01230
Biosynthesis of amino acids
pep01240
Biosynthesis of cofactors
pep04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AQ505_15915 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AQ505_15915 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AQ505_15915 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AQ505_15915 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AQ505_15915 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AQ505_15915 (glyA)
Enzymes [BR:
pep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AQ505_15915 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ALL08836
UniProt:
A0A0P0NM03
LinkDB
All DBs
Position
complement(3812731..3814005)
Genome browser
AA seq
424 aa
AA seq
DB search
MERDELIFKLISEEQERQENGIELIASENFVSIQVMEAAGSALTNKYAEGLPGKRYYGGC
EVVDEIEKIAIARAKELFGAEWVNVQPHSGAQANAAVFLALLQPGDKILGFDLSHGGHLT
HGSPVNFSGKIYQPFFYGVDRETGLIDYQQLKEVALREKPKVIICGASAYSRDWDYQFIR
AVADEIAALVVADISHPAGLIARGLLANPLPHCHVVTTTTHKTLRGPRGGLIMMAKDFDN
PFGQKTPKGELKKMSALLDMAVFPGTQGGPLEHIIAAKAIAFGEALSDTYLNYIIQVKKN
AAVMAQAFVNLDYKIISGGTDNHLMLIDLRNKNISGKAAENALGAAGITVNKNMVPFDDK
SPFVTSGIRIGTAAITTRGLKENHMEEIVALIDKVINHPEDEVGLKKVREQVERMMEENP
LYKS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atagaaagagatgaactgatttttaagctgatctctgaagaacaggaacgtcaggaaaat
ggaattgaattgatcgcttccgaaaactttgtcagcatacaggtgatggaagctgcaggc
tctgcactgaccaataaatacgcggagggcttgcctggaaagcgttattatggtggttgt
gaagtggtagatgagattgaaaagatagccattgccagagcaaaagaattgtttggtgcc
gaatgggtaaacgttcagccacattcaggagcgcaggcaaatgctgcggtttttctggcc
ttgctgcagcctggagataagatccttggttttgacctttcccatggtggacacctgacg
catggttctccggtaaacttttcaggaaagatctatcagccgtttttttatggtgtagac
cgcgaaacgggcttgatcgattatcagcaattgaaggaagtagccttgagagaaaagcca
aaagtaatcatctgtggagcttcggcctattccagagattgggattatcaatttataagg
gcagttgccgatgagattgctgcattggtggttgctgatatttcacatcctgcgggtctt
attgccagaggtttattggccaatcctttgccgcattgccacgtagtaaccactaccacg
cataagacattaagagggcctagaggtggactgattatgatggctaaggattttgacaat
ccatttggccagaaaacaccaaaaggtgaacttaaaaagatgtcggcattgctggatatg
gcggtatttcctggtacacagggcgggccattggagcacatcatcgccgcaaaagcaatc
gcctttggggaagcgctcagcgatacttatctgaactatattattcaggtgaaaaagaat
gctgcggtcatggcacaggcctttgtgaacctggattataaaatcatatcgggtgggaca
gacaaccatctgatgctgattgatttgagaaataaaaatattagtggcaaagctgccgaa
aatgccttaggcgcagcagggatcacggtgaataaaaacatggtgcctttcgatgataaa
tcgccatttgtgacctcaggaatcagaattggcactgctgccatcacgacccgtgggtta
aaagaaaaccatatggaagagattgtagccctaattgataaagtaattaaccatccggaa
gatgaagttggactaaagaaagtacgtgagcaggtagaacggatgatggaagaaaaccca
ttatataaatcataa
DBGET
integrated database retrieval system