Pedobacter sp. PACM 27299: AQ505_18100
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Entry
AQ505_18100 CDS
T04140
Name
(GenBank) hypothetical protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pep03000
]
AQ505_18100
Transcription factors [BR:
pep03000
]
Prokaryotic type
Helix-turn-helix
GntR family
AQ505_18100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
Motif
Other DBs
NCBI-ProteinID:
ALL07232
LinkDB
All DBs
Position
complement(4291527..4293005)
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AA seq
492 aa
AA seq
DB search
MGQMLRPWKTLLNIELGTDKAVFQQIADGVIAEILKGRLKPGMSLPGSRILAEDITVNRK
TVVLAYEQLIAEGWLETVYKKGTFVSEKLPKQKVRRKQINEDSISALKNFSFTAYHRGSP
SEVPSDMPLIVFNDGLPDVKLAPLDELARAYKRIFQQKARWRMLGYANERGEERLRAAIS
TMLSMDRGLNFNVNEICITRGSQMALYLTAQVLVKAGDFVAIENPGYRPAFDVFQRAGAT
MIPVGLDEQGINLQQLEEICKVQPIKAVYVTPHHQFPTTRSMKADRRLQLLNLSNQYGFA
IVEDDYDHDYHFGSRSFQPLASYEAAHNVIYISSLSKLIAPAVRVGYVAGPEAFIDSLAA
LRMTIDRQGDPVMENAVAELMEEGLVNKHAKRALGIYRGRRAMMVKYLDLYMTGLADYEL
PEGGLAFWLVFKQPVNTIHLVEQLLKTGVQVISTERFSFDEQPLNALRLGYASLEAEEME
RGIRLIAALLVK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggccagatgttgagaccttggaaaacgctattaaacattgaattgggaacagataaa
gctgtttttcagcagattgctgatggtgttattgctgaaattttaaaagggagactaaag
cctggtatgtcattgccgggaagcaggattctggcagaagacatcaccgtcaatagaaaa
acagtggtcttagcctatgagcaattgattgcagaaggctggctggaaactgtttacaag
aaaggaacctttgtctcagaaaaactgcctaagcaaaaggttaggcgtaaacaaatcaat
gaggacagtatttctgctttgaaaaacttctcttttacggcatatcataggggaagtcca
tcagaagttccaagtgatatgcctttaatcgtctttaatgacggtttacctgatgtgaaa
ttggccccattggatgaattggccagggcttataaaaggatattccagcagaaagcacgt
tggcgtatgttaggttatgcaaatgagaggggagaggagcgacttcgtgcagcgatatcc
accatgctgagcatggatcggggcttgaattttaatgtcaacgagatttgtattaccaga
ggaagtcagatggcactttacctaaccgctcaggttttggtgaaagccggagattttgta
gccatagaaaaccctggatatagacccgcatttgatgtgtttcagcgtgcaggtgccacc
atgatccctgttggattagatgaacaaggcatcaatttgcagcaattggaggagatctgt
aaggtccagccgataaaagcagtgtatgtgacgcctcaccatcaatttcctactacgagg
agtatgaaggcagatcgccgtttgcagctgctaaatctttccaatcaatatggttttgcc
attgtggaggacgattacgaccatgattatcatttcgggtccaggagctttcagcctctg
gcaagttatgaggcggcacataatgtgatttatatcagttctttgagtaagctgattgca
cctgcggtaagggtggggtatgtggccggaccggaagcctttatagattctttagcggca
ttgaggatgacaattgatcgtcagggagatccggtaatggaaaacgcggtcgccgaattg
atggaagaaggactggtaaataagcatgctaaacgggcattaggaatttataggggacga
agagcaatgatggtcaaatacctggatctatatatgacagggctggcagattacgaactt
cctgaaggtggacttgccttttggctggtctttaaacaacctgtaaataccattcatcta
gtagaacagctgttgaaaactggcgttcaggtgatttctacagagcggttttcttttgat
gaacagcctttgaatgcactgcgactgggttatgcctctttggaagccgaagaaatggaa
cgcggcatcaggttgattgccgctttattagtgaaatga
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