Pedobacter sp. PACM 27299: AQ505_18485
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Entry
AQ505_18485 CDS
T04140
Name
(GenBank) pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pep03009
]
AQ505_18485
Enzymes [BR:
pep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
AQ505_18485
Ribosome biogenesis [BR:
pep03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AQ505_18485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALL07298
LinkDB
All DBs
Position
complement(4384182..4384904)
Genome browser
AA seq
240 aa
AA seq
DB search
MKYPSFKDLILFENDDYIVVNKPPFVASLDERGGSGEVNILRLAKQYSADAQVCHRLDKE
TSGAIIIAKTPDAYRNVAIQFEKRRVNKVYHAVVDGQFTFNELFIDLPILNDGNKSVTID
RKEGKRAETIFNSIKHYRHYTLVECKPITGRMHQIRIHLATQRAAIAGDDMYRGKPVFLS
TMKKGYRIAKDDEELPIMKRFALHARHLVFKGLDGADIVIDAPYPKDFATLIKLLDKFDA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatatccttcttttaaagatcttatcctattcgaaaacgatgattatatcgtcgta
aataaacctccttttgtagcctcgctggatgagcgcggcggatcaggcgaggtcaatata
ttacgtttggcaaagcagtattctgctgatgcacaggtatgtcatcgtttagacaaagaa
acttcaggcgcgattatcattgcgaaaactcctgatgcctatcgcaacgttgcgatacaa
tttgaaaagcgtagagtaaacaaagtataccacgcagtggtagacggacagtttactttt
aacgagctgtttatcgaccttcccatccttaatgacgggaataagagcgttaccatcgac
agaaaagagggtaaacgtgcagaaaccatttttaattccataaaacattaccgtcattat
accctggtagaatgtaagccgattaccggtcgtatgcaccagatcaggattcacctggcg
acacagcgcgcagcaattgctggtgatgatatgtatcgtggaaagccggtattcttatcg
accatgaaaaaaggttaccgcattgcaaaagatgatgaagaacttccgattatgaaacgt
tttgctttacatgccagacatttggtatttaaaggattagacggcgctgatatcgtaatt
gatgcaccatatcctaaggattttgcaacactgataaaactacttgataaatttgacgct
taa
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