Pedobacter sp. PACM 27299: AQ505_21020
Help
Entry
AQ505_21020 CDS
T04140
Name
(GenBank) ABC transporter
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AQ505_21020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_21020
Transporters [BR:
pep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AQ505_21020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
nSTAND3
SMC_N
AAA_22
DUF87
AAA_29
MMR_HSR1
NB-ARC
DUF2207_C
RsgA_GTPase
AAA_23
SH
FtsK_SpoIIIE
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALL07757
LinkDB
All DBs
Position
4988869..4990668
Genome browser
AA seq
599 aa
AA seq
DB search
MKHLRFLNKYFYKYKWWIIPGVFFVVISNIFAVIPAQVIGHAFNLITENIQIYGLFEGFE
RRSIIYDIFSQSLFYFGLLVLVLYLLRGIFLFFMRQTIILMSRHIEYDMKNEIYAHYQEL
SLGFYRRNNTGDLMNRATEDVNRVRMYVGPAIMYAINTGVLFILIIYAMFSVNGTLAIFS
LLPLPVLVVIIYFVNTIINKRSEEIQEQLSRLSSFVQERFSGIRVIKSYVREDHTKAVFA
AESQGYKNNAMGLVKVQALFYPTMLLLVGLSTILTVYIGGKQVIEGAITPGNIAEFIVYV
NQLTFPVSMLGWVTTLIQRASASQKRINEFLHLKPEIVSGDADILPVNGNIRFENVSFTY
PDTGIQALKNISFEIEQGQFVAIIGRTGSGKSTLANLMMRMYDVDEGKLMMDGVAIDTLN
LQHYRSQFGFVPQEVFLFSDTIRNNIAFGLDVVDQDAVIQASKNAAVYHNIINFEHKFET
MLGERGITLSGGQKQRVSIARALIKEPKVLIFDDCLSAVDTRTEEEILNNLGRVMKGKTS
ILIAHRISTIKNANKILVLDDGKIIEQGTHAELLQINGNYAEMYQNQLLEEETNSSSAI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacctcagatttttaaacaaatacttctataaatataaatggtggattattccg
ggggtgtttttcgtggtcatctcgaatatcttcgcagtgatcccggcacaagtgatcggc
catgccttcaatttaattactgaaaacatacagatctatggcttatttgaaggtttcgaa
cgccgaagcatcatctatgatatctttagtcagagtctcttttactttggacttttagta
cttgtactttatctgctgagagggatattcctctttttcatgcgtcaaaccattattctg
atgtccagacatattgagtacgacatgaagaacgagatctatgcccattaccaagaattg
agtctgggtttttaccgccgcaacaataccggcgatttgatgaaccgtgcgactgaagat
gtaaaccgggttcgtatgtatgtagggcctgccatcatgtatgccatcaatacaggtgta
ttgttcatattgatcatttatgccatgttctcggtcaatggtacgctggcaattttctcg
ctgcttccccttccggtactggtggtgatcatttattttgtcaataccattatcaataaa
agaagtgaggaaattcaggaacagctttcccgactgagcagttttgtgcaggaaaggttt
tcggggatccgagtgatcaagtcttatgtgcgtgaagaccatactaaagcagtctttgca
gcagaaagccagggttataaaaataatgccatgggattagtaaaggttcaggctttattt
tatccgactatgctcctgcttgttggcttgagtaccatcttaaccgtttatatcggcggt
aaacaagtcatcgaaggtgccattactccaggaaatatagcggaatttattgtgtatgta
aaccagcttacttttccagtatctatgctgggctgggtcaccacactgattcaacgtgcc
tcggcttctcaaaaaaggatcaatgagtttcttcatttgaagccagagattgtttccggc
gatgcagacatcttgccggtgaacggaaatatccgttttgaaaatgtgagctttacttat
ccggataccggaattcaagctttaaaaaacatcagctttgagattgagcagggccagttt
gtagccatcattggccgtacaggctctgggaagtccaccctagcgaacttaatgatgcgc
atgtacgatgtggacgaagggaaattgatgatggatggtgtggcgattgatacgcttaac
ctacagcattacagaagtcagtttggctttgttccacaggaagtctttttgttttcggat
acaatcagaaacaacatcgcctttggcctggacgtagtcgatcaagacgcagtgatacag
gcatctaaaaatgctgctgtatatcataacatcatcaattttgagcacaaatttgaaacc
atgcttggcgaacggggcattaccctttccggcggacaaaaacagcgggtatctatcgcc
cgtgctttaattaaagagccgaaagtcttaattttcgacgattgtctttccgcagtcgac
acccgcacagaagaagaaatcctcaacaacctgggcagggtgatgaaaggaaagaccagt
attctgattgcgcatcggatatccactataaagaatgccaataaaatcctggttttagac
gatgggaagattattgaacaaggtacacacgccgaattgttgcaaattaatggcaattac
gctgaaatgtatcaaaatcaattgttagaagaggaaacaaacagcagctctgccatataa
DBGET
integrated database retrieval system
