Pedobacter sp. PACM 27299: AQ505_21450
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Entry
AQ505_21450 CDS
T04140
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AQ505_21450
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pep01007
]
AQ505_21450
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pep03016
]
AQ505_21450
Enzymes [BR:
pep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
AQ505_21450
Amino acid related enzymes [BR:
pep01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AQ505_21450
Transfer RNA biogenesis [BR:
pep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AQ505_21450
Prokaryotic type
AQ505_21450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
ALL07834
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All DBs
Position
complement(5092834..5095503)
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AA seq
889 aa
AA seq
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MSISTKYDPAATEDKWYSYWMSKNFFHSEPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQ
DVLIRKARMQGKNACWVPGTDHASIATEAKVVAMLKERGIDKKDLTREEFLKYAWEWKEK
YGGIILEQLKKLGASCDWERTRFTMEDDMSAAVIDCFIHLYKKGRIYRGVRMVNWDPAGK
TSVSDEEVIRKEVNQKLYYIKYTVAGGNDQEFLTIATTRPETIMADAAICVNPNDERYAH
LKGKKVFVPLINREIPVIEDDYVTMDFGTGCLKVTPAHDLNDYELGLRHKLPVIDILNDD
GTLNELAQILVGEDRFIARKKIAKLLDEAGHLDKVEDYKSQVGFSERTDAAIEPKLSMQW
FCKMDEMAKPALEDVLNGDVKLIPEKFQNTYRHWMENIRDWNISRQLWWGQQIPAWYDNQ
GNWVVAKTKEEALTEFLKLKDIDGAFTEEEANGFKNQLAPFVNQDPDVMDTWFSSWLWPI
SVFDGFKNPDNKEINYYYPTNDLVTAPEILFFWVARMIMAGHEFRGQKPFTNVYLTGIVR
DKQGRKMSKSLGNSPDPIGLIEKYGADGVRVGMLLCSPAGNDLMFDESYCEQGRNFANKI
WNAFRLVKGWEVDYTLPNPNQQAISWFENRFNEALVEIEDNFKQYRLSEALMTSYKLVWD
DFCAWYLEMVKPAYQHPIDAETLKFTIGFFEKILTLLHPYMPFLTEELWHDELFSARGEM
DCCIVASYPVVGSIDVPLLKDVEIVKGLIAEIRNVRNTKQISPKDALPLSIKVNSGLDYE
KWFNVISKVVNIAEVTFVTDKIAGAVSFMVGKDEFFIQLNETIDVAAEKERLNAELTYLQ
GFMKSVDAKLSNERFVQNAKPEIIQNERNKKADAESKISTILGQIESLG
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccacaaaatacgacccggcagcgaccgaagataaatggtacagctactgg
atgtcaaagaactttttccattctgaaccggatgaacgcgagccatataccattgtaatt
ccacctccaaacgtcacaggtgtattgcacatgggacatatgttgaacaatacgattcag
gatgtattgattcgtaaggcaagaatgcaaggtaaaaatgcatgctgggtacctggtact
gaccatgcgtctattgcgacagaggcgaaagtcgtggcgatgttaaaagaacgtggtatt
gacaagaaggacctgacaagggaagaattcttaaaatatgcatgggaatggaaagaaaaa
tacggtggtattattctggaacaattgaagaaattaggtgccagctgcgactgggagcgt
actcgttttaccatggaagacgatatgtctgctgcggtaatcgactgtttcatccattta
tataaaaagggaagaatttaccgcggggtaaggatggtgaactgggatccggcaggaaaa
acttctgtttctgatgaggaagtgatccgtaaagaggtaaatcaaaaactatattatatc
aaatatacagttgcgggaggcaatgatcaggagtttctgactattgccactacgcgtccg
gaaaccattatggcggatgcagccatctgtgtgaacccaaatgatgagcgttatgcacac
ctgaaagggaagaaagtgtttgtaccgttgatcaaccgtgagattcctgtaattgaggat
gattatgtaacgatggactttggaacaggttgtttaaaggttactccggcgcatgatctg
aacgattatgaattaggattgagacataaattaccggtaattgacatcttaaatgacgat
gggactttaaatgagctggcacagattcttgtgggtgaagatcgttttatcgcgagaaaa
aagatagccaaattattggatgaggctggacacctggataaggtagaagactataaatca
caggtaggtttttctgagcgtacagatgcggcaattgagccaaaactatctatgcaatgg
ttctgtaaaatggacgaaatggcgaagcctgcattggaagatgtgttgaatggtgatgtg
aaattaattccagaaaaattccagaacacttatcgtcattggatggaaaatatccgtgat
tggaatatcagtcgccagttatggtggggacaacaaatcccggcctggtatgacaatcag
gggaactgggtagttgcaaaaactaaagaagaagctttaacggaatttttaaagctaaaa
gatattgatggtgcgtttacggaagaagaagcaaatggtttcaaaaaccagttggctccg
tttgtaaatcaagatcctgatgtaatggatacctggttctcttcctggttatggcctatt
tctgtgtttgatggatttaaaaacccagataataaagaaatcaattattactatccgacc
aatgatttggtgactgctcctgagattttattcttctgggtagcaagaatgatcatggct
ggacatgagttccgcggtcagaagccatttacgaatgtttatttaacaggtattgttagg
gataaacaaggacgtaaaatgtctaaatcattagggaattctcctgatccaatcggactg
attgaaaaatacggtgctgatggggtacgtgttgggatgctgctttgctctcctgcagga
aatgatttgatgtttgatgaaagttactgcgaacaaggaaggaattttgctaataagatc
tggaatgcattccggttggtaaaaggatgggaagtagattatactttgccgaatccaaat
caacaagcgatttcatggttcgaaaatcgtttcaatgaagcattagtagaaattgaagat
aactttaaacagtaccgtttatcagaagcgttaatgacttcctataaattagtatgggat
gacttctgtgcatggtatctggaaatggtaaaacctgcttatcagcatccaattgatgca
gaaacgttaaagttcaccatcggtttctttgaaaagattttgacgcttttacatccatat
atgcctttccttacggaagagctgtggcatgatgagttgttcagtgcaagaggagagatg
gattgctgtattgtagcttcatatcctgttgtaggttcaattgatgtgccattattgaaa
gatgtagagatcgtaaaaggactgattgcagagatcagaaatgtacgtaacaccaaacaa
atttctccaaaagatgctttgcctttgagtattaaggtaaactctggattggattatgaa
aagtggttcaatgtgatctctaaagttgtaaatattgctgaagtaacctttgtaacagat
aaaatcgctggtgctgtgagtttcatggttggaaaagatgaattctttattcaactgaat
gaaacgattgatgtagcagcagaaaaagaacgtctaaatgctgaattgacttatctgcaa
ggtttcatgaagtcggtagatgcgaagttgagcaacgaacgttttgttcaaaatgcgaaa
cctgagatcattcagaatgaacgcaataaaaaggcagacgcagaatctaaaatcagtact
attttaggacaaatcgaatctttagggtaa
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