Pedobacter sp. PACM 27299: AQ505_21590
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Entry
AQ505_21590 CDS
T04140
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AQ505_21590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pep03400
]
AQ505_21590
DNA repair and recombination proteins [BR:
pep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AQ505_21590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ALL07857
LinkDB
All DBs
Position
complement(5132252..5133013)
Genome browser
AA seq
253 aa
AA seq
DB search
MRSIWKGAIGFGLVNIPVKLFSGVQSSTLDLDMLDERDHANIKFKRVNEKTQKEVPFEHI
VKGYYLKDQYIVLNEHDFEEVKPEKTKVIEIENFVDLVDINPVYYETSYYTQPESQGKKA
YALLLQALIKSKKAGVARFVLRNSEHLCVIHPMGGIIVITKIRFQEEIRDTKDLKPKEAP
SINPKELSVGMALIKQYAAPFNIDSFKNDYSKELLKIIKAKAQGKRATVKKMKTKKASSD
DLYEQLLESLKGA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctatctggaaaggtgctataggatttggtctggtaaatatcccggtaaaatta
ttctcaggagtacaaagcagtaccctggatttagatatgctggacgaaagggatcatgcc
aatatcaagtttaagagagtaaatgagaaaacgcagaaggaagtccctttcgagcatatt
gtgaaaggttattacctgaaagaccaatacattgttttgaatgagcatgattttgaagaa
gtgaaaccggaaaaaacgaaggtcatagaaattgaaaatttcgttgatctggtggatatt
aatcctgtttattatgaaacttcctattatactcaacctgaaagtcaagggaaaaaggcc
tatgctttacttttacaggcactaataaagtcaaagaaggcaggcgttgcgcgttttgtg
ctgcgcaacagtgagcatctttgtgtcattcatcctatgggcggaattattgtcatcacc
aagatccgttttcaggaagaaattagggatacaaaggatttaaagccaaaagaagcgccc
agcattaatccaaaagagttatcggtaggaatggccttaattaagcaatatgctgcgcca
tttaacatagatagctttaaaaatgactactcaaaagagttattaaagattataaaagcg
aaagcccagggcaagcgcgcgactgttaaaaaaatgaaaactaaaaaagcaagtagcgac
gatttatatgagcaattgctggaaagtttgaaaggagcatag
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