Pedobacter sp. PACM 27299: AQ505_22305
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Entry
AQ505_22305 CDS
T04140
Name
(GenBank) carbohydrate-binding protein SusD
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_22305
Transporters [BR:
pep02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AQ505_22305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ALL07972
UniProt:
A0A0P0NK49
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All DBs
Position
complement(5325218..5327101)
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AA seq
627 aa
AA seq
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MKSIIRNTYILTIALMAVLASGCKKDMLTVEPPDKIRADLVWQDGALAQAFVTDIYNGLS
VGGFSEQMLSSVSDESLFTHPNRGIDLVNASTINPSTLGWVDDTWAYAKMYNRIRACNMT
IERLSGSDNGLTDQNLKDQLLGEAHFLRAYFYHQLLRYYGGVPLITKVYGLNDDFRIKRS
TYKECTDFIVKDCEDAQRLFVGKTMDKGRGSIIAALALKSRVLLYAASDLHTKSKISTLE
IASAQGFAEALPLLAYDDNNQTQRWQAAKDAAKAVMDLGTGYKLDLSAPVSAAAGRLNYK
SLAMGGGSKAPGMDAAAASELILGRYFIDRSDMRFGRANGPNGYRNWAGNTPIGLLVDDY
EMNDGTKFSWSNPAQKQNPYENRDPRFYATILYDGAGWKPRDKVVGGVDPANQIQTGEYD
LMIDGKLTTYKGLDTRSGPIESWNGSWTGYYTQKFTDPDPNIVEASNPQFIPWPFFRYTE
AVMNYIEASIELDQLGEATSWLNKIRFRAGMPAVTATDKEGLKEVYRHERRIEMVYEEQR
YHDARRWMIGKTTLGRKTTYIKVSGKFKPGKTMLNLYRYDPTIYDYTYTPTTETAQENRV
WLDKIYFRPFSRDEVNKNTFLVQNPGY
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaataatcagaaatacatatatacttacaattgcattaatggcagtcctggct
tcaggctgcaagaaagatatgctgacagtcgaaccaccagataagatccgcgctgacctc
gtttggcaggacggtgccctggctcaggctttcgtaaccgatatttataatggcctgagt
gtaggtggattttctgaacaaatgctcagctcggtatctgatgaatctttatttacgcat
ccaaaccgtggaatagacctggtgaatgccagtaccatcaatccctctacattgggttgg
gtagatgatacctgggcttatgccaaaatgtacaaccgcatacgtgcctgtaacatgacc
attgaaagattgtctggctcagataacggtttaaccgatcagaatctgaaagatcagctg
ttgggagaagcacattttttgcgtgcctatttttatcatcagctgctgagatactatggc
ggagttccactgatcactaaagtgtatggccttaatgatgattttagaatcaaacggtca
acttataaagaatgtaccgattttattgtaaaggattgtgaagatgcacagcgattgttt
gtcggtaaaaccatggataaaggaagaggaagcatcattgctgcgctggctttaaaatca
agggtattactgtatgctgccagtgacttacataccaagtcaaaaatatcaaccttagag
attgccagtgcacaaggtttcgcagaggccctgccattattggcttacgacgacaacaac
cagacgcagcgatggcaggcggcaaaggatgcggcaaaagcagtgatggatttaggtaca
ggttataaattagacctttcagctccggtatcagctgcagcaggtcgcctgaattataaa
agtctggccatgggcggcggcagtaaagctccaggaatggatgctgctgcggcttcagaa
cttatcctgggcaggtattttatcgaccgttctgacatgcgttttggcagagcaaatggt
ccgaacggctatcgaaactgggcaggaaatacaccaatagggctgttagtggatgattat
gaaatgaatgatgggacgaagttcagctggtcaaatccagcgcaaaaacagaacccttac
gaaaatcgggatccgcgtttttatgccactatactctatgatggcgcaggctggaaacca
agagataaggtagtggggggcgtagaccctgccaatcaaattcaaaccggtgaatatgat
ttaatgatagatggaaaattaaccacttacaaaggcttagatacgcgttcaggccctatt
gaaagctggaatggcagctggactggttactatactcagaaattcaccgatccggatcct
aatattgttgaagcttctaatcctcagtttatcccttggccattctttagatacacagag
gcggtgatgaactatattgaagcaagtatagaactggatcaattgggagaagccaccagc
tggttgaataaaatacgtttcagagccggaatgcctgcagttacagcaaccgataaagaa
ggactaaaagaagtttatcgtcatgagcgtagaattgagatggtatatgaagaacagcgt
taccatgatgcacgccgctggatgatcggaaagacaacactgggtagaaaaaccacctat
atcaaggtttccggtaaatttaaaccgggtaaaaccatgctgaacctgtaccgttacgat
cctaccatttacgattatacctatacgccaaccacagagacggctcaggaaaaccgagta
tggctggataaaatttatttcagacctttcagcagggatgaagtaaataagaataccttc
ctggtacaaaacccaggctattaa
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