Pedobacter sp. PACM 27299: AQ505_22880
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Entry
AQ505_22880 CDS
T04140
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AQ505_22880
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pep01007
]
AQ505_22880
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pep03016
]
AQ505_22880
Enzymes [BR:
pep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
AQ505_22880
Amino acid related enzymes [BR:
pep01007
]
Aminoacyl-tRNA synthetase
Class II (U)
AQ505_22880
Transfer RNA biogenesis [BR:
pep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AQ505_22880
Prokaryotic type
AQ505_22880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
DUF2922
Motif
Other DBs
NCBI-ProteinID:
ALL08072
LinkDB
All DBs
Position
complement(5450517..5452916)
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AA seq
799 aa
AA seq
DB search
MKISYKWLTQFLTTDKTPEELSLILTNIGLEVESLETVQPIAGGLEGLVIGHVISCVQHP
NADRLRVTTVDVGTGTNIQVVCGAPNVGEGQKVVVATVGTTVYPNEGEPFKINKSKIRGE
VSEGMICAEDEIGLGVSHDGIMVLPEATEVGITAKAYFNLEDDYLYEIGLTPNRADAASH
LGVARDLAAYLRLPITMPDIAAFKTANEKLAIPVTVEDAEACPRYSSVSISGVTVKTSPD
WLQDKLKVIGIRPINNIVDITNYVLHELGQPLHAFDADQLTGGKVIVKKCAEGTPFVTLD
GVERKLSAEDLMICNAEVPMCIAGVFGGKNSGVSETTRNIFLESAYFDAKSVRKTSKRHG
LKTDASFRFERGTDPDITVYALKRAALLIQELAGGEISSTVSDIYPVPIAAFEVEVNYNN
INRLIGVEIPHEEIKAIITSLNMEVAAETAEGLSLKVPTYKVDVTRECDVTEEVLRIYGY
NNIEIPTKVNASLSYGTKPNKEQTQHVIADMLTANGYLEIWCNSLTKGAYSKVPEEAVHI
LNPLSSDLNVMRQGLLMPALESVAYNLNRKTTDIKFYEFGKTYHLINEKYVERPRLLIVL
SGANQSEQWNHKPSPVTFYHLKAAVDAVIGRLGITNYQSEEVNDENFAYGLKYFRGDKAI
VTFGAVTAADQKTADVEKDVFYADFDWALLLEIIKKNKIVNKEVSKYPAVRRDLSMLVDL
DVTFDQLKTIAFKTEKKLIKSVQVFDVYVGDRLPEGKKSYALNFTLQDEEQTLTDKQIDA
VMQKIISNLAQTAKAEIRK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatcatacaagtggctgacacaatttctgacaactgataaaactcctgaagaa
ctttccttaatcctgaccaatatcgggctggaagtagaaagtctggaaaccgtacaaccg
attgcaggtggtttagaaggattggtgattggacacgtcatcagctgtgtgcaacatcct
aatgccgatcgtttacgtgtgactacggtagatgtaggaacaggaacgaatattcaagtg
gtatgcggtgcgccaaatgttggcgaaggccagaaagtggtggttgctactgtaggaact
accgtttatccgaatgaaggagagcctttcaaaatcaacaaatctaagatcagaggcgaa
gtttctgaaggaatgatctgtgcagaagatgaaatcggattgggggtttctcatgatgga
attatggtgcttccagaagctactgaagttgggattactgcgaaagcctatttcaatctg
gaagatgactatttgtatgaaattggattgacgcctaatcgtgctgatgcagcttctcat
ttaggtgtagcaagagatttagcagcttatttacgtttgccgatcacaatgccggatatt
gctgcttttaaaacagcaaatgaaaagctggccatcccggtaactgtggaagatgcggaa
gcttgtccgagatacagcagcgtttctatttctggtgtaacggtaaaaacttctccagat
tggttgcaggataaattaaaagtaatcggcattcgtccgatcaacaatatagtagacatt
accaattatgtattgcatgaattaggacagcctttacatgctttcgatgcagatcaattg
actggtggcaaagtgatcgtgaagaaatgtgcagaaggtacgccttttgtaacacttgat
ggggtagagcgcaagctttcagcagaagatctgatgatttgtaatgcagaagtgccaatg
tgtatcgctggtgtatttggcggtaaaaattctggagtaagcgaaacgaccagaaatatc
ttcctggaaagtgcttattttgatgctaaatcggtgcgtaagacttcaaaaagacatggt
ttaaagactgatgcctctttcagatttgagcgtggtacagatcctgatattactgtttat
gctttaaaacgtgcggctttattgattcaggaattagcaggtggagaaatttcttctact
gtttctgatatttatccagtaccaatcgctgcttttgaggtagaagtgaattacaacaac
atcaatagattgatcggggtagagatccctcatgaagaaatcaaagccatcattacttca
ttgaacatggaagtcgcagctgaaactgcggaaggattgtctttaaaagtaccaacttat
aaagtagatgtgactcgcgaatgcgatgtaacagaagaggtattgagaatctatggttac
aataatattgagattccaactaaagtgaatgcttctttatcttacggtactaagccgaat
aaagaacaaacacagcacgtaattgcagatatgttaactgcaaacggctatctagagatc
tggtgtaactctttaactaaaggtgcttattctaaagtgcccgaagaagcagttcatatt
ttgaacccattgagttcagatttgaatgtgatgcgtcagggtttattaatgcctgcattg
gaaagtgtagcttataatctgaatagaaaaacaactgatattaagttttatgaattcggt
aaaacttatcatttgatcaatgagaaatatgttgaacgtccgcgtttactgatcgtgttg
tctggagcgaatcaatcagagcaatggaatcataaaccatcaccagttactttctaccat
ttgaaagcggctgtagatgctgtaatcggacgtctgggcattaccaattaccaatcagaa
gaggtaaatgatgagaacttcgcttatggattgaagtatttcagaggggataaagcgatc
gttacttttggtgcggtgactgctgctgatcagaaaactgcagatgtggaaaaagacgta
ttttacgcagattttgactgggcattgctgttggagatcattaaaaagaataaaattgtg
aataaggaagtatctaaatatccagcggtaaggagagatttatcgatgttggtagatctg
gatgtgacctttgatcaactgaaaactattgcctttaaaacagagaagaagctgattaag
agcgtacaggtgttcgatgtgtacgttggagaccgattgccggaagggaagaagtcttat
gccttaaacttcactttgcaagatgaagagcagaccttaaccgacaagcaaattgatgcg
gtgatgcaaaagattatttctaacttagcgcaaacagcaaaagcggaaataagaaaataa
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