Pedobacter sp. PACM 27299: AQ505_23135
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Entry
AQ505_23135 CDS
T04140
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep03030
DNA replication
pep03430
Mismatch repair
pep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AQ505_23135
03430 Mismatch repair
AQ505_23135
03440 Homologous recombination
AQ505_23135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pep03032
]
AQ505_23135
03400 DNA repair and recombination proteins [BR:
pep03400
]
AQ505_23135
Enzymes [BR:
pep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AQ505_23135
DNA replication proteins [BR:
pep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AQ505_23135
DNA repair and recombination proteins [BR:
pep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AQ505_23135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_14
AAA_5
TIP49
AAA_2
Rad17
AAA_30
RNA_helicase
DNA_pol3_delta_C
AAA_7
AAA_18
PIF1
VapE-like_dom
AAA_19
RnlB_antitoxin
AAA_24
AAA_assoc_2
nSTAND3
AAA_16
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ALL08116
UniProt:
A0A0P0NLJ4
LinkDB
All DBs
Position
5516436..5518292
Genome browser
AA seq
618 aa
AA seq
DB search
MENFIVSARKYRPATFETVVGQHHITGTLKNAIKNNQLAQAFLFCGPRGVGKTTCARILA
KTINCTNLTPEQEACGTCDSCVSFQTGHSFNFHELDAASNNSVDDIRSLIEQVRIPPQAG
KYKIYIIDEVHMLSANAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
QVDDISSLLNKIAVRENISVEADGLHIIAQKADGGLRDALSMFDQIVSYTNKNLTYKSVI
DNLNILDYDYYFKLTQYLLSADVSNALILFDEILNNGFDGNNFINGLASHLRNLLVAKDP
QTTKLLEVSENIKQKYISQSQQTPVSFVLTALNLANQCDLIYKNSKNQRLQVELALIKMC
HIPSVLQLAQQPVQNAATDQNQIKKKTNVSPPAAPILSQVPSETQAATQAPAPVPYPTTQ
SVPVLAEPAPKPVPATALSAPVKSSTAPTAKIALTQKISLNGSNATGTFIPSLTDMNAKS
AGADSDEPKYISGDSRESFSQEQFLSLWNQYAENAKTAGKINIYTLMIGAEPQLEGTELI
IAKVEHKLQEGLLQEEMVDLMNFLRPRLKNFSISVKTIQAAREVVNRLYTSTEKYQFLLD
KNPKLEELRRKFNLDVNP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttatagtttcagcccgtaaataccgtccggcaacgtttgaaaccgtggtt
ggccaacatcacattacaggtacacttaaaaatgccatcaagaataatcaattagctcag
gcttttttattctgtgggccgaggggagtgggtaaaacaacttgcgcaagaattcttgcc
aaaacgatcaattgtaccaatctgactcctgaacaggaagcttgcggtacttgtgattcc
tgtgtttcttttcaaaccggtcattcttttaattttcacgaattagatgcggcatccaac
aactctgttgacgatatccgtagtctgattgaacaggtacgcattcctcctcaagcagga
aaatataaaatctatatcattgatgaggtacacatgctttcggcaaatgcgtttaatgcc
tttctgaaaacattagaggaaccgccatcgtatgctatatttatattagccactacagaa
aaacataaaatacttccaaccattctttcccgttgtcagatttttgactttaacaggatt
caggtggatgatatttccagcttactgaataaaattgcagtacgtgaaaacatcagtgta
gaagcagatggcctgcatattattgcacaaaaagcagacggtggattgagagatgccctt
tctatgtttgaccagattgtgagttataccaataagaacctaacttataaatcagtaatt
gacaacctgaatatcctggattatgattactattttaagctaactcaatatttgctaagc
gctgatgtgagcaatgccttgattctttttgatgagatcctgaacaatggttttgatgga
aataactttatcaacggattggccagtcacctaagaaatttattggtagcgaaagatccg
cagaccacaaagttgttagaggttagcgagaatattaaacaaaaatacatcagccaaagt
cagcagacacctgtttcctttgtgttgaccgctttaaaccttgccaatcagtgtgacctg
atttataagaacagcaagaaccaacgacttcaggtggagttggcactgatcaagatgtgt
catattccatcagtcctgcaacttgcccagcaacctgtacaaaacgccgcaactgaccaa
aatcagattaaaaaaaaaactaatgtaagtccgccggcagcgccaattttatctcaggtt
ccttccgaaacacaagcagcaacacaagcgcctgcacccgtaccctatccaacaacacag
agtgtacctgtccttgctgaacctgcgccgaaacctgttcccgcaacagctcttagtgca
cctgtaaaatcttctactgcgcctactgcaaaaattgctttaactcaaaaaatcagtctg
aatggcagcaatgccactggtacgttcattccttctttaacagatatgaatgcaaaatct
gccggggctgacagcgatgaacctaaatatattagtggggattcaagggaatctttttcg
caggagcagtttttgagcttatggaatcaatatgcggaaaatgcaaaaaccgccggaaag
attaacatctataccttaatgattggtgctgaacctcagttagagggcacagaactaatc
atagccaaggttgaacataaacttcaggaaggacttttacaggaagaaatggtagatctg
atgaacttcctcagaccacgattgaaaaacttcagcatctctgtgaaaactattcaggca
gcacgtgaagtcgtaaaccgactatataccagtacagagaagtatcagttcttactggat
aaaaacccgaaattagaggaactccgtcgtaagtttaaccttgacgtaaacccttag
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