Pedobacter sp. PACM 27299: AQ505_23145
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Entry
AQ505_23145 CDS
T04140
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_23145
Transporters [BR:
pep02000
]
Other transporters
Pores ion channels [TC:
1
]
AQ505_23145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALL08118
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Position
5518855..5520918
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AA seq
687 aa
AA seq
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MRIFIVTSLLLLSFSAAAQQQDTTKRLKEVEIKPYFSTQPLLRATGAIGLVDRSLLDKQA
GGSLVAALNTIPGIRMEERSPGSYRLSIRGSLLRSPFGVRNVKIYFDDFPLTDAGGNSYL
NALEMSALNRIQILKGPQSSLFGANSGGVVLIQPLQLSADSIVAMLKLETGAYGTFLQSL
SAGQQFKKYSINITQAYQRSDGYRDHSAMDRKYFQISQQFDYSKKNKLKALIFYSDLHYN
TPGGLDITQYMDRPQASRPAAGALKSAIEQKAGIYSNTLFGGLSNDWIINDHFKHVISLF
SSYTDFKNPFITNYEKRKELTLGLRSYLEYQKQTTSFNYRFNIGLESTQTSSDIVNYNNN
MGQPAALKASDQLKAASNFAFAHLNIDFLNKWLLELSASGNLYQYTYQSIAPIASDQRTN
RFDFQLMPRIALSYLLVPELALRTTVSKGYSPPTIAEIRASDQVINVDLQPEFGWNHEIG
VLYQSADRRFNIDLTGFYYRLQSAIVRRLNENENEYFINAGGTKQWGLESAFSLWLVPVN
HSKFLRGLQLYNAITLSNFKFDHYADNTADYSGNQLTGVPKQVIISSIDCYFPGQWSIFA
QHNYTSSLPLNDANTVYARKYHLVQARLSWKGLKIGKSDLSLFTGADNLLNEKYSLGNDL
NAVGRRYYNAAAGRNFYAGLSLQLKRN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagaatatttatagtgacttcattgttgttactttctttttccgcagcggcgcagcag
caggataccacaaaaagattaaaagaggtagaaatcaaaccttatttttctacacagcct
ttattaagagctacgggtgccatcggtttggttgatcgctctttacttgacaagcaagct
ggaggttctttggtagctgccttgaatactatccctggaatacgcatggaagaacgctct
ccaggcagctatcgtttgtccatccgtgggagcttgctccgttctccttttggagtcaga
aatgtgaaaatctattttgacgattttccattgacagatgccggagggaacagctacctg
aatgcactagaaatgagtgccctaaaccgcattcaaattctaaagggtccgcaaagtagc
ctctttggtgcaaactccggaggagttgtattgatacaaccgctacagcttagcgcagac
agtattgtcgccatgttaaaactggaaacaggtgcttatggtacctttcttcagagttta
tctgccggacagcaattcaaaaaatacagcattaacatcacccaggcttaccagcgcagt
gacggttatcgcgaccatagtgctatggaccgcaaatatttccagatttcacaacaattc
gactacagtaagaaaaacaagctgaaagccttgattttctattctgatctacattacaat
actccaggaggattggatatcacacaatatatggatcgtccccaggcttccaggccagct
gctggtgcattgaaaagtgctattgagcaaaaggcagggatttacagcaatacccttttc
ggtggcctctccaatgactggattatcaacgatcattttaagcatgtgatttccctgttt
tcttcttataccgatttcaaaaacccttttatcaccaattatgagaagaggaaagaactg
actttaggactgcgctcctatctggaataccaaaaacaaacaaccagtttcaattatagg
ttcaatattggactggaaagcacacaaacttcctctgatattgtcaattataacaataac
atgggtcaacctgctgcattgaaagctagtgaccagttaaaagcagcatcaaactttgct
tttgcacatttaaatattgatttcctaaacaaatggctcctggaattatctgcaagcggg
aatttataccaatacacttatcaaagtattgctcctatagccagtgatcaaagaaccaac
cgctttgattttcagctgatgccaagaattgccctatcctatttacttgtgccagaactt
gcattgcgtactacagtgagcaagggctattcaccgcccacaatagcagaaatcagagct
tcagaccaggtcataaacgtggacttacaaccagaattcggctggaatcatgaaatcggt
gttctttaccaaagcgctgaccgcaggttcaatattgacctgacaggattttattaccgt
ttgcaaagtgccattgttcgacgtttaaacgagaatgaaaatgaatatttcatcaatgct
ggcggcaccaaacaatggggtctggaaagcgccttctctttatggctggttccagttaat
cactctaaattcttacgtggcttacaactttataatgccattaccttaagtaattttaaa
ttcgaccattatgcagacaataccgctgattattctggaaatcaactgacgggtgttcca
aagcaggtcatcatcagcagcattgattgttattttccagggcaatggtctatatttgca
cagcacaattacacttccagcctacctttaaatgatgccaatactgtttatgccaggaaa
taccaccttgtccaggccagactaagctggaagggcttaaaaattggtaaatctgacctg
tcgctctttaccggagcagataacctgctgaacgagaaatatagccttggcaacgacctg
aatgctgttggcaggcgttattataatgctgcagccgggagaaacttctatgccggctta
tccttgcaactgaaaagaaattaa
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