Pedobacter sp. PACM 27299: AQ505_23790
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Entry
AQ505_23790 CDS
T04140
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pep03000
]
AQ505_23790
Transcription factors [BR:
pep03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AQ505_23790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_24
HTH_3
MarR
HTH_Tnp_ISL3
IF2_N
HTH_11
Xre-like-HTH
HTH_10
HTH_23
HTH_38
HTH_AsnC-type
HTH_AraC
HTH_7
HTH_Crp_2
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
ALL08235
UniProt:
A0A0P0NL07
LinkDB
All DBs
Position
complement(5659519..5660532)
Genome browser
AA seq
337 aa
AA seq
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MERINIKQLAKALNLSTSTVSRAFRDNSDISKETKEKILAKAKELNYQPNHYASNLREQK
SKTIAVIVPELANNFFSQAIHGIEKIARGKGYHILIYATDDDYEKEVSFIRHLHNGRADG
IIMSVSGEANDHTYLNELSQERLPLVFFDRVYEDIITPRVITNDYDSSFSATEHLIKQGC
KKIAYLVINKNLSIGKFRMQGYIDALAKYEIPFEDRLVVDCTNSYAKNSLILKRLLLDIK
PDGIFTSVERLAFATYYACYDLKISIPEELMVIGFSSLEIAPLLNPSLTTITQPATKIGI
EAANLLFKMLDHPLEVNPNQKIVLNSKLIKRRSTERD
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcatcaatatcaagcaattagctaaagccctgaatttatctacttcaacggtt
tccagggctttcagagacaacagtgacatcagtaaagaaacgaaggagaaaatcctggcg
aaggcaaaggagttaaactatcagccgaatcactatgcaagcaaccttagggagcaaaaa
agtaaaacgattgcggtcattgttcctgagctggcgaacaactttttctcgcaggccata
cacggcattgaaaaaattgcaaggggcaaaggctatcatattttaatttatgccactgat
gatgattatgagaaagaagtttccttcatcagacatttacacaatggcagagcggatggg
atcattatgtcggtttccggagaagcaaatgaccacacgtatttgaatgaactgagccag
gagcgtctgcctttggtatttttcgaccgggtttatgaagacatcatcacgccaagagtc
attaccaatgactacgacagcagtttttctgcgacagagcatctgatcaaacaaggctgt
aaaaagattgcctacctggtgatcaataaaaatttatccatcggtaagtttaggatgcag
ggatatattgatgccctggcgaaatacgaaattccttttgaagataggctggtggtagac
tgcaccaatagttatgctaaaaattccctgattttaaaaaggttattgctggatattaag
ccagatggcatctttacttccgtagaacgattggcttttgctacctactacgcatgttat
gacctgaaaatctccattcctgaggaactgatggtcatcggtttctccagtctggagatt
gcacctttattgaatccttctttaacgacgattacacagcccgctactaaaattggaatt
gaagccgcgaaccttttgttcaagatgctggatcatccattagaggtgaatccaaatcaa
aagattgtcctcaattcgaaactgatcaaaaggcgttctaccgaacgggattaa
DBGET
integrated database retrieval system
