Pedobacter sp. PACM 27299: AQ505_23965
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Entry
AQ505_23965 CDS
T04140
Name
(GenBank) pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pep03009
]
AQ505_23965
Enzymes [BR:
pep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
AQ505_23965
Ribosome biogenesis [BR:
pep03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AQ505_23965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALL08264
UniProt:
A0A0P0NKK6
LinkDB
All DBs
Position
5694403..5696001
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AA seq
532 aa
AA seq
DB search
MMKDNNRNSRDDKSKSGNRSSTGQNRSGGDSSYRDKSKFDDKEGKDKKFGGPRDFNPREG
GSRDFKPREGGSRDYKPREGGSRDFKPREGGSRDFKPREGGSRDFKPREGGSRDFKPREG
GSRDFKPREGGSRDFKPREGGSRDFKPREGGSRDFKPREGGSRDFKPREGGSRDFKPREG
GSRDFKPREGGSRDFKPREGSSRPHSAGSSRDVPPSDKTRSYIKKDHFGKGDQPFRKFDD
NKGGASRSTDSRPFRKREDEGGSRDFKPRDARPDREEGSNTTMRSRKAPFVKDDGLIRLN
RYIANSGICSRRKADELIAAGVVSVNGEAISELGHKIDPAKDEIRYNGELLKREKKIYVL
LNKPKDYITTTDDPQERRTVMQLVEKASRERIYPVGRLDRNTTGLLLMTNDGDLADKLSH
PRNGITKIYHVELSKTLSQGDFNKIQFGLELEDGLIKPDNISYVAGGSKKEIGIQIHSGK
NRIVRRIFEHLGYDVVKLDRVVYGNLTKKDLPRGRWRYLEEHELIQIKHLIK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagacaacaacaggaacagtcgggatgacaagtccaaatcgggcaacagaagt
tcaacaggccagaatcgtagtggaggagactcttcttacagagataaaagcaagtttgac
gacaaagaggggaaagataaaaaatttggtggcccgagagattttaaccctagagaaggt
ggatcaagagacttcaaacctcgtgaaggcggatcaagggattacaaaccacgcgaaggt
ggttcaagagatttcaaaccacgtgaaggtggttcaagagatttcaaaccacgtgaaggt
ggttccagagatttcaaaccacgcgaaggtggttcaagagatttcaaaccacgcgaaggt
ggttcaagagatttcaaaccacgcgaaggtggttcaagagatttcaaaccacgcgaaggt
ggttcaagagatttcaaaccacgcgaaggtggttcaagagatttcaaaccacgcgaaggt
ggttcaagagatttcaaaccacgtgaaggcggttcaagagatttcaaaccacgtgaaggc
ggttcaagagatttcaaaccacgtgaaggtggttcaagagatttcaaaccacgtgaaggt
agttcaagacctcatagtgcaggtagctcaagagacgtacctccttctgacaaaacacgt
agttatataaagaaagatcatttcggaaaaggggatcagcctttcaggaaatttgatgat
aataaaggtggcgcttcaagaagtactgacagcagaccttttagaaaaagagaagacgaa
ggtggttcaagagatttcaaacctcgtgatgcacgtcctgaccgcgaagaaggtagcaat
accactatgcgtagcagaaaagcacctttcgttaaggatgatggcttaattcgtttaaac
cgttacatcgccaattcaggaatttgttcccgtcgtaaagcggatgagctgattgctgct
ggtgtagtatctgtaaatggtgaagcaatttctgagcttggtcataaaatcgaccctgcg
aaagatgagatccgttataacggggagttgttgaaacgcgaaaagaaaatttacgtgttg
ttaaacaagcctaaagattatattacgactactgatgatcctcaggaacgtcgtacagta
atgcaattggtagagaaagcaagcagagaacgtatttatccggtaggaagattagaccgt
aacactacaggtttattattgatgaccaatgatggcgatcttgctgataaattatctcac
ccaagaaatggcatcactaaaatctatcatgtagaattaagtaagactttaagtcagggt
gatttcaacaaaatccagttcggtttagaattggaagatggtttgatcaaacctgataac
atttcttatgttgctggtggcagtaaaaaagagatcggtattcagatccacagtggtaaa
aatagaatcgtaagaagaatatttgaacacttaggttatgatgtcgtgaaacttgaccgt
gtagtttacggcaatctgactaaaaaagaccttcctcgtggaagatggagatatttagaa
gagcatgaattgattcagatcaagcatctgatcaagtaa
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