Pedobacter sp. PACM 27299: AQ505_25200
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Entry
AQ505_25200 CDS
T04140
Name
(GenBank) energy transducer TonB
KO
K02014
iron complex outermembrane recepter protein
Organism
pep
Pedobacter sp. PACM 27299
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_25200
Transporters [BR:
pep02000
]
Other transporters
Pores ion channels [TC:
1
]
AQ505_25200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
CILP
PapC_C
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
ALL08479
LinkDB
All DBs
Position
complement(5979541..5981844)
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AA seq
767 aa
AA seq
DB search
MKKIHLVLMVLLYTLFSIPSYAAGGLAEFKGKVTDADNKEPLVGATVYISDLKAVTSTNA
NGEFILKNIPSKGRFLLEVRFVGYKTFSQIVDLGSLNKLDIAMEPSAIESAEVVITGSPF
SANNKTNSLSVVTVGKDKLAQAGGTNLVDAISKVPGISQVSTGGAISKPTIRGLGYNRVL
TMVDGAREEAQQWGDEHGIEVDQFSAARVEILKGPASLLYGSDALGGVINIIDDLVPPPG
TFNGNFTTSYATNNGLSASSLMLQGNDNGFVYRGRASYKNAYGFAYKDAVVPNSGFNEFN
LNGMVGLNKSWGYSHLTFSRFQTNIGLVEHGPNEDGQYVNDEGEVISKAEAQERRLGLPF
QNINHYRAALNSNFILGSGQLKTTFAFQRNIRKEFEESATEPGLNLNLNSYTYDVKYYFP
NAGKWEPAIGVQGMYQNNVNKGDEFLIPDYNSNNIGAFVYLKRNFEKGAFNIGARYDYKK
INGEALAVDGEPLFTAFHNQFSNVSGSLGFAYEVAKNLVLKGNAGSGFRAPNIAELAANG
RHEGTFRYEIGNSNLKQETSLQFDLGLEYTANSVTFGLNAYANRIYNYIYAGNFNNETTG
VSDGNGMTATLPVYRFVQTNADLIGGEASMDFHLIKSLHFENSFAYVKGTNRADDQPLPF
IPAASINNELRFEPTIKGLSGTYVKVGLTNVLKQARFDSFETQTDGYTLLDAGIGTAINT
KKGKFNLWVTGQNLLDKKYFNHLSRYKMEGIYNTGRNVTFGVSVPFL
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatacatctggtattaatggtcttattatataccttattttcaattccttct
tatgctgccggaggattggcagaatttaaaggtaaagtaactgatgccgacaataaagag
ccactggttggggctacagtctacatcagcgacttaaaagcagtcaccagtacgaatgca
aacggagaatttatcctgaaaaatatcccttcaaaaggacggttcctattggaagttcgc
tttgtaggttataaaaccttttcgcaaatcgtagatcttggcagcttgaacaagctagat
atcgctatggagccttccgctatagaaagtgcggaagtggtcatcaccggatcgccattt
agtgccaacaacaaaaccaatagcttatccgtagtgacggtaggaaaagataagctggca
caggccggcggcacaaatttagtagatgccatttcaaaggttcctggaatttctcaggtg
agtactggcggtgcgatttctaaaccgaccattcggggtttaggatacaaccgggtattg
accatggtagatggcgcaagagaagaagcacagcaatggggcgatgaacacggtattgaa
gtcgatcagttctctgcagcaagggtagaaatcttaaaaggtcccgcaagtttgctttac
ggatctgatgcattgggtggtgtaatcaatattattgatgatttagtccctcctcctggt
acttttaacggtaatttcaccacttcctatgcgaccaacaatggattaagcgcttcctca
ttgatgcttcagggcaatgacaatggtttcgtatatcgaggccgagcttcttataaaaat
gcctacggctttgcttataaagatgcggtagtgccgaattccggatttaacgaattcaat
ttaaatggtatggtgggtttaaataagagctggggatattctcacctgactttctcccgt
ttccaaaccaatattggtttagtagaacatggaccgaatgaagatggtcaatatgtaaat
gacgaaggcgaagtgatctctaaagccgaagcacaagagcgcagattaggactgcctttt
caaaatatcaaccattaccgcgctgcattaaacagtaattttatcctgggttctgggcag
ttgaaaacaactttcgcctttcaacgcaatatcaggaaggaatttgaagaaagcgcgact
gaaccagggttgaatttaaacctgaactcttatacttatgatgtgaaatattatttccca
aatgctgggaaatgggagcctgcgatcggtgttcaaggcatgtatcagaacaacgtaaac
aaaggcgatgagtttttgatccctgattataacagcaataacatcggtgcttttgtgtac
ttgaaacgtaatttcgaaaaaggtgcctttaatattggtgcacgttacgattataaaaaa
ataaacggagaagcactggcagtggatggagaacctttatttaccgctttccacaatcaa
ttttctaatgtttccggatcattgggtttcgcgtatgaagtggctaaaaacctggtgttg
aaaggaaatgcagggtcaggattccgcgctccaaatattgcagaattggcagctaacggt
cgccatgaaggaacattcagatatgagatcgggaattcaaacctaaaacaggaaactagt
ctacagtttgacctcggactggaatacacggctaattcggttactttcggattaaatgcc
tatgccaaccgcatttataactacatctacgcggggaatttcaacaatgaaaccacaggt
gtaagcgacggaaacggcatgactgcaactttaccagtgtatcgttttgtgcaaaccaat
gcagacctgatcgggggagaagcctcgatggattttcacctgatcaaatccctgcacttt
gaaaactctttcgcttatgtgaaaggaacaaaccgtgcagatgatcagcctttacctttt
atcccggcagcgtcgatcaacaatgaattgcgctttgaaccaactatcaaaggcctttcc
ggcacctatgtgaaagttggattaaccaatgtattgaaacaggcacgttttgatagtttt
gaaactcaaacggatggatatactttgttagatgcaggaatcggaacggcgatcaatact
aaaaaaggtaaatttaatctttgggtaaccggacaaaatctattggataaaaagtatttt
aaccacctgagcaggtataaaatggaaggaatttacaataccggaagaaatgtgactttc
ggtgtcagcgtgcctttcttgtag
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