Pedobacter sp. PACM 27299: AQ505_25360
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Entry
AQ505_25360 CDS
T04140
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AQ505_25360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pep02000
]
AQ505_25360
Enzymes [BR:
pep01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
AQ505_25360
Transporters [BR:
pep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AQ505_25360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_22
AAA_21
AAA
AAA_25
AAA_16
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ALL08506
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All DBs
Position
6017610..6019430
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AA seq
606 aa
AA seq
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MKTYFRLLSFAKPIEKFAIPYIIATLLAVFFNTFNFTLLAPLLDTLFFDQSSATGAMKVA
GQWDLLAQFKNYIASTVEHFGKEEALKIVCAVILASVLLSNFFRYLSQRFMEDLRVHTLL
NIRKTVFNNVMNMHIGFFNNERKGDIISKVSSDVQVVQFTVTNTLQVVFKEPLQLLFYVF
VLFSISVKLTLFSLLVIPVSGFIISKIVKRLKEQATATHESFAKMIGFLDEALSGIKIVK
AFNSTERTKEKFHAENQFYSNLNRKMVRRQQLASPVSQSLGIFVIVIIVLYGGGLVLSGS
KEFTASDFIMYIAVFSQVMQPVKAISDSFSGIHSGIAAGERVLELIDTEPQVVNKPDAIE
LKEFKESLTFENVSFSYQDKVVLNNISLTVPKGKTIALVGPSGGGKSTLMDLIPRFHDPK
SGVIKIDGLNYKDLTVESIRSKMGIVNQESFLFNDTIFNNIAFANPDATEEEVITAAKIA
NAHEFILGQEQGYQTYVGDRGGRLSGGQRQRICIARAVLANPPIMLLDEATSALDTESEK
LVQQALNNLMQNRTSIVIAHRLSTIQHADTIVVIEQGEIKETGNHSELMSHNGLYRRLID
MQAFTD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatattttagattactgtcgtttgcgaaacctattgagaagttcgccatccct
tatattattgctacattattagccgtatttttcaacaccttcaactttacgctgctagca
cctttgttagacaccctgttttttgaccaaagcagtgctacaggagctatgaaagttgcc
ggacaatgggatttattggcccagttcaaaaactatatcgcttccactgtagagcacttt
ggaaaagaagaagccttaaaaatcgtatgtgcggtaattttggcttccgtattactttct
aacttcttccgttatttatcacagcgattcatggaagacctcagggtacataccctgctg
aacattagaaaaactgtatttaataatgtgatgaacatgcacattggctttttcaacaac
gaaagaaaaggcgatatcatctctaaagtatcttcggacgtacaggtggtacaatttacc
gtaaccaacaccttgcaggtagttttcaaagagcccttgcaattgctcttctatgtgttt
gtattgttcagcatttccgtaaagctgactttgttctctctattggtgattccggtttct
ggtttcatcatcagcaagattgtgaagcgcctgaaagaacaggctactgctacacatgag
tcctttgcaaaaatgattggcttcctcgatgaagcattgagtggcataaaaatcgtgaaa
gctttcaactctaccgaaaggacaaaagaaaaattccacgcagaaaaccagttctattcc
aacctgaacagaaaaatggtgagaagacagcagctggcctctccagtatcacaatctctg
gggatttttgtcattgtcatcattgtattgtacggtggtggattggtgctgagcggaagt
aaagagtttactgcttcagatttcatcatgtatattgcggtattctctcaggtgatgcaa
ccagttaaagccattagtgactcctttagcggcattcactccggtattgctgccggcgaa
agggtattggaattaattgatacggagccacaggtggtcaacaaaccagatgccatcgaa
ttaaaagaattcaaagagtcgctgactttcgaaaatgtaagtttcagctatcaggataaa
gtcgttttaaacaacattagcttaaccgttcctaagggaaaaaccatcgcattggttggt
ccatctggtggtgggaaaagtactttaatggacttaatccctcgtttccatgacccaaaa
tcaggcgtaattaaaattgacggactgaattataaagacttaactgtagaaagtatccgc
agtaaaatgggtatcgtaaaccaggaatctttccttttcaatgatactattttcaataat
atagcctttgccaatcctgatgccacagaagaagaagtgatcacagcggcaaaaattgcc
aatgcacatgaatttattctaggtcaggaacaaggttatcaaacctatgtaggcgatcgg
ggtggaaggttatccggcggacaaagacaaaggatttgcattgccagagcagtattagcc
aatccaccaatcatgttactggatgaagcgacttctgctttagatacagaatctgaaaaa
ttagtgcagcaggccctaaataacctgatgcaaaacaggacttctattgtgattgcccac
cgtttgagtaccattcagcatgcggatacgattgtggtaattgagcagggtgaaatcaaa
gaaaccggaaatcatagcgaactgatgagtcataatggcttatacagacgattaatagat
atgcaggcatttactgactaa
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