KEGG   Phalaenopsis equestris: 110017909
Entry
110017909         CDS       T05601                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
peq  Phalaenopsis equestris
Pathway
peq03030  DNA replication
peq03410  Base excision repair
peq03420  Nucleotide excision repair
peq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:peq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110017909
   03410 Base excision repair
    110017909
   03420 Nucleotide excision repair
    110017909
   03430 Mismatch repair
    110017909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:peq03032]
    110017909
   03036 Chromosome and associated proteins [BR:peq03036]
    110017909
   03400 DNA repair and recombination proteins [BR:peq03400]
    110017909
DNA replication proteins [BR:peq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110017909
  DNA Replication Termination Factors
   ELG1-RFC complex
    110017909
Chromosome and associated proteins [BR:peq03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110017909
DNA repair and recombination proteins [BR:peq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110017909
  Check point factors
   HRAD17(Rad24)-RFC complex
    110017909
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Mg_chelatase Rad17 Viral_helicase1 AAA_28 RuvB_N AAA_11 AAA_19 AAA_5 nSTAND3 AAA_24 AAA_25 AAA_assoc_2 DNAX_ATPase_lid AAA_18 AAA_30 RCF1-5-like_lid RNA_helicase ResIII MipZ MeaB IstB_IS21 NTPase_1 AAA_3 bpMoxR ABC_tran DO-GTPase1 T2SSE SLFN-g3_helicase KTI12 AAA_7 SRP54
Other DBs
NCBI-GeneID: 110017909
NCBI-ProteinID: XP_020570728
LinkDB
Position
Unknown
AA seq 343 aa
MASSSAPPPSSPQPSSSSSSSYYEIPWVEKYRPTKVADVVGNTEAVSRLQVIARDGNMPN
IILSGPPGTGKTTSILALAHELLGSHFKEAVLELNASDDRGIDVVRNRIKMFAQKKVTLP
SGRHKVIILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCALVRFS
RLSDQEILSRLLIVLEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENV
FKVCDQPHPLHVKNMVRNVIEGRFDDACFGLKQLYDLGYSPTDIITTLFRIIKNYDMAEY
LKLEFLKETGFAHMRICDGVGSLLQLSGLLAKLALVRETAKAP
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggcttcttcatctgccccgcctccctcttctcctcagccgtcttcctcttcctcgagc
tcctactatgagattccgtgggtcgagaaataccgccccaccaaagtcgccgatgtggtc
ggcaacactgaggcagtctcccggctccaggtcatcgcgcgtgacggaaacatgcccaac
atcatcttatcgggtcctcctggaactgggaagacgacaagcattcttgcccttgcgcat
gagttattagggtctcacttcaaggaggcagttctggaattgaacgcttcagacgatagg
ggaattgatgtcgtcagaaacaggatcaagatgtttgcacagaaaaaggtgacattgcct
tccggaaggcacaaggtaataattctggatgaggctgacagcatgacatctggtgctcaa
caagctctgaggagaaccatggagatctactccaataccacgaggtttgctcttgcatgc
aatacttcatccaagatcattgagcccatccagagcagatgtgcacttgttcgcttttca
agattatctgatcaagagatccttagccgtcttctcattgtgcttgaagctgagaaggtc
ccatacgtacctgaaggtctcgaggctattattttcaccgctgacggtgatatgaggcag
gctttgaacaatttacaggccactttcagcggatttcgatttgttaatcaggagaatgtt
tttaaggtctgtgatcagcctcaccccttacacgtgaagaacatggttcgaaatgtgatt
gagggaaggttcgatgatgcttgctttggacttaagcagctctatgatttgggttattcc
cccacagacataatcaccactctctttcgaataattaagaactacgacatggccgaatat
cttaaactggagttcctgaaggaaactggatttgcccacatgaggatctgtgatggggtt
ggctcgctccttcagctgtcaggcctccttgccaagcttgctctggttagggaaactgca
aaggctccataa

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